Miyakogusa Predicted Gene

Lj1g3v2546300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2546300.1 tr|G7KY88|G7KY88_MEDTR RING finger protein
OS=Medicago truncatula GN=MTR_7g074140 PE=4 SV=1,84.51,0,seg,NULL;
RING/U-box,NULL; ZF_RING_1,Zinc finger, RING-type, conserved site;
zf-RING_2,Zinc finger, ,CUFF.29148.1
         (1338 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS337312                                                     448   e-125
gnl|LJGI|TC63858 similar to UniRef100_A7NXY7 Cluster: Chromosome...   176   2e-43
gnl|LJGI|TC67304 similar to UniRef100_A7Q9V6 Cluster: Chromosome...   127   2e-28

>gnl|LJGI|FS337312 
          Length = 655

 Score =  448 bits (226), Expect = e-125
 Identities = 226/226 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagggaacacagacatgttcagaggttctccaacatcatcatcatcatcgtcgtcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atggaagggaacacagacatgttcagaggttctccaacatcatcatcatcatcgtcgtcg 489

                                                                       
Query: 61  ttgaatttatcttccaattcgagaagattcgggttattatccgcgtcgaacatcattcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttgaatttatcttccaattcgagaagattcgggttattatccgcgtcgaacatcattcag 549

                                                                       
Query: 121 gcgccgttatcgttgcttcttgaatattccggtattctccctccgaggtccaaccagcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gcgccgttatcgttgcttcttgaatattccggtattctccctccgaggtccaaccagcat 609

                                                         
Query: 181 cagccgaattccgacgtcgctgctgctcccagcgacggcgaggttt 226
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cagccgaattccgacgtcgctgctgctcccagcgacggcgaggttt 655


>gnl|LJGI|TC63858 similar to UniRef100_A7NXY7 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (71%)
          Length = 1191

 Score =  176 bits (89), Expect = 2e-43
 Identities = 296/365 (81%)
 Strand = Plus / Plus

                                                                        
Query: 922  tatcgggccttgttaccagcaccagtttggtatcgtttcttcctgaataaagaatatgga 981
            |||||||| ||||| ||| | ||||||||||| || || ||| |||| || |||||||||
Sbjct: 590  tatcgggctttgttgccaacgccagtttggtaccgatttttcttgaacaaggaatatgga 649

                                                                        
Query: 982  agcctcttttcatcattgatgacaggattgtatctaacatttaagctcacatctgttgtt 1041
            || |||||||||||| |||  ||||||||||||||||| || || || |||||||| |||
Sbjct: 650  agtctcttttcatcactgaccacaggattgtatctaactttcaaactaacatctgtagtt 709

                                                                        
Query: 1042 gaaaaggtgcaatctttctttgctgcagtgaaagcattgtcacgtaaagaagtgcactat 1101
            || ||||| |  | |||||||  |||  | |||||||| |||    | ||||| || |||
Sbjct: 710  gagaaggtccggtgtttctttagtgctttaaaagcattatcaaaacatgaagttcattat 769

                                                                        
Query: 1102 ggggctcatgcaacatcagagcaggtcaatgcagctggtgatctttgtgctatctgtcag 1161
            |||||| ||||||||   || ||||| ||||| |||||| | ||||| ||||| || |||
Sbjct: 770  ggggcttatgcaacaatggaacaggtaaatgctgctggtaacctttgcgctatatgccag 829

                                                                        
Query: 1162 gagaagatgcatgccccaatcttgctccgttgtaaacacattttctgtgaagactgtgta 1221
            |||||||||||| | || |||||| |  | ||||||||||| ||||| ||||| ||||||
Sbjct: 830  gagaagatgcattctcctatcttgttgtgctgtaaacacatgttctgcgaagagtgtgta 889

                                                                        
Query: 1222 tctgagtggtttgagagggaaaggacctgcccattgtgcagggctttggtaaaacctgca 1281
            || || ||||||||||| ||| |||| |||||||| |||||||| | ||||||||| || 
Sbjct: 890  tccgaatggtttgagagagaacggacttgcccattatgcagggcatcggtaaaacccgct 949

                 
Query: 1282 gatct 1286
            |||||
Sbjct: 950  gatct 954


>gnl|LJGI|TC67304 similar to UniRef100_A7Q9V6 Cluster: Chromosome chr8 scaffold_68,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_68, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (67%)
          Length = 1472

 Score =  127 bits (64), Expect = 2e-28
 Identities = 139/164 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1123 caggtcaatgcagctggtgatctttgtgctatctgtcaggagaagatgcatgccccaatc 1182
            ||||||||||| ||||| || || |||||||| || ||||| ||||||||| ||||| ||
Sbjct: 803  caggtcaatgctgctggcgacctatgtgctatatgccaggaaaagatgcattccccagtc 862

                                                                        
Query: 1183 ttgctccgttgtaaacacattttctgtgaagactgtgtatctgagtggtttgagagggaa 1242
            ||| | || |||||||||||||| || || || |||||||| || |||||||||||||||
Sbjct: 863  ttgttgcgctgtaaacacattttttgcgaggagtgtgtatcagaatggtttgagagggaa 922

                                                        
Query: 1243 aggacctgcccattgtgcagggctttggtaaaacctgcagatct 1286
            ||||| |||||| | ||||| || ||||| |||||||| |||||
Sbjct: 923  aggacttgcccactatgcagagcattggtgaaacctgctgatct 966