Miyakogusa Predicted Gene
- Lj1g3v2536050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2536050.1 Non Chatacterized Hit- tr|G7JS00|G7JS00_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,38.3,2e-17,seg,NULL; coiled-coil,NULL,CUFF.29142.1
(1809 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81961 1832 0.0
>gnl|LJGI|TC81961
Length = 1330
Score = 1832 bits (924), Expect = 0.0
Identities = 943/948 (99%), Gaps = 1/948 (0%)
Strand = Plus / Plus
Query: 60 tgtggagaatggggttggagaagcagctactagggatcagaatctggtgagcaataatgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgtggagaatggggttggagaagcagctactagggatcagaatctggtgagcaataatgt 343
Query: 120 taaggacgagcgaactgatgtttctgagactgcagcgaactcgaatggggttggagaaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 taaggacgagcgaactgatgtttctgagactgcagcgaactcgaatggggttggagaaat 403
Query: 180 gtcaactagggatcagaatttggctagtgatggcaaggatgagcctgctcctcctttgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtcaactagggatcagaatttggctagtgatggcaaggatgagcctgctcctcctttgga 463
Query: 240 gactgctaatgaggcacatgagcaaagtgtgaattggaatggggttgtggaagtaccaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gactgctaatgaggcacatgagcaaagtgtgaattggaatggggttgtggaagtaccaaa 523
Query: 300 cggagatcagaatgtggcgacaagtggaaaggatgagcttaatcaaccaacggagtctgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cggagatcagaatgtggcgacaagtggaaaggatgagcttaatcaaccaacggagtctgc 583
Query: 360 agacaggcaaagtactaatgttgattcgaatggagtcaatggacatctgccaaatggtaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 agacaggcaaagtactaatgttgattcgaatggagtcaatggacatctgccaaatggtaa 643
Query: 420 agaatgtgccacctcagaagagacaattaaaacattgggaaatgaaaatgatattctcaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agaatgtgccacctcagaagagacaattaaaacattgggaaatgaaaatgatattctcaa 703
Query: 480 acagaacgctgtcacatcagacgaaacaattggaaaattgaaaggagaaaatgctatgct 539
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 704 acagaacgttgtcacatcagacgaaataattggaaaattgaaaggagaaaatgctatgct 763
Query: 540 cattcagaaagagaccacttcagaagagacaatcaagaaactaaaagaagaaaatgatac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 cattcagaaagagaccacttcagaagagacaatcaagaaactaaaagaagaaaatgatac 823
Query: 600 atacattcagaaagaggccatatcagaagacataatcaggaacttaaaagcagaaaatgc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 atacattcagaaagaggccatatcagaagacataatcaggaacttaaaagcagaaaatgc 883
Query: 660 tatgcacattcagaaagaggctatatcggaagagacaatcagaaaattgaaagaacaaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 tatgcacattcagaaagaggctatatcggaagagacaatcagaaaattgaaagaacaaaa 943
Query: 720 tgacatacatatgcaaaaagaggttgcatcag-aagagaccaccagaaaattgaaagaac 778
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 944 tgacatacatatgcaaaaagaggttgcatcagaaagagaccaccagaaaattgaaagaac 1003
Query: 779 atgatatgcgtgttcagaaagaggccatattagaagatacaattagaaagttgaatgaag 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 atgatatgcgtgttcagaaagaggccatattagaagatacaattagaaagttgaatgaag 1063
Query: 839 aaaatgatatgcacatgaagaaagaagccatatcagaagagacaataagcaaattgaaaa 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 aaaatgatatgcacatgaagaaagaagccatatcagaagagacaataagcaaattgaaaa 1123
Query: 899 aagaaaatgcattccacattcagaaagaggccatatcagaggagacaattaaaaaactga 958
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1124 aagaatatgcattccacattcagaaagaggccatatcagaggagacaattaagaaactga 1183
Query: 959 aagaagaaaatgatgaacatgtttataaagaggttaccttggaagagt 1006
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 aagaagaaaatgatgaacatgtttataaagaggttaccttggaagagt 1231
Score = 56.0 bits (28), Expect = 8e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1074 cgcacaattacagggagagaataattccttaa 1105
|||||||| |||||||||||||||||||||||
Sbjct: 1299 cgcacaatgacagggagagaataattccttaa 1330
Database: LJGI
Posted date: Nov 10, 2011 4:10 PM
Number of letters in database: 32,788,469
Number of sequences in database: 47,486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 47486
Number of Hits to DB: 280,514,749
Number of extensions: 32764713
Number of successful extensions: 32764713
Number of sequences better than 1.0e-05: 9761
Number of HSP's gapped: 32758886
Number of HSP's successfully gapped: 18352
Length of database: 32,788,469
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 25 (50.1 bits)