Miyakogusa Predicted Gene
- Lj1g3v2535040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2535040.1 Non Chatacterized Hit- tr|I1L6X1|I1L6X1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8009
PE=,87.46,0,seg,NULL; K homology RNA-binding domain,K Homology domain;
Eukaryotic type KH-domain (KH-domain
type,NODE_42273_length_1107_cov_70.825653.path1.1
(864 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57961 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 1713 0.0
gnl|LJGI|TC67660 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 464 e-130
gnl|LJGI|TC79709 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 212 3e-54
gnl|LJGI|TC67728 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 96 4e-19
gnl|LJGI|TC72746 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC57961 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1268
Score = 1713 bits (864), Expect = 0.0
Identities = 864/864 (100%)
Strand = Plus / Plus
Query: 1 atgtcaggtttgtacaatcccaacttctcaccttcacctgtgagagctgctgcagcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 atgtcaggtttgtacaatcccaacttctcaccttcacctgtgagagctgctgcagcttct 97
Query: 61 gctcagattagaggcaccccatcttcagaaatggatagtcagtatctgtcagagttgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 gctcagattagaggcaccccatcttcagaaatggatagtcagtatctgtcagagttgctg 157
Query: 121 gcagagcgtcaaaagcttggacctttcatgcaagtgcttcctacatgcaatcgcctcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcagagcgtcaaaagcttggacctttcatgcaagtgcttcctacatgcaatcgcctcttg 217
Query: 181 aatcaagaaatattaagagtctctggaatgttgtccaatcaaggttttggtgactttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aatcaagaaatattaagagtctctggaatgttgtccaatcaaggttttggtgactttgat 277
Query: 241 agactgcggcatagaagccctagtcctatggctccttcgaacctcatgtctaatgtccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agactgcggcatagaagccctagtcctatggctccttcgaacctcatgtctaatgtccct 337
Query: 301 gggacaggattgggtggatggaatggtcttcagcaggagagattatgtggaactcctgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gggacaggattgggtggatggaatggtcttcagcaggagagattatgtggaactcctgga 397
Query: 361 atgacaatggactggcaagttgcccctgcaagtcctacttcatacactgttagaaggata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atgacaatggactggcaagttgcccctgcaagtcctacttcatacactgttagaaggata 457
Query: 421 ttacgcttggaaattcctgttgatacattccccaatttcaattttgttggaagacttctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttacgcttggaaattcctgttgatacattccccaatttcaattttgttggaagacttctg 517
Query: 481 ggacctagaggcaattctctgaaacgggtagaagcaacaacaggttgcagggtgtttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggacctagaggcaattctctgaaacgggtagaagcaacaacaggttgcagggtgtttatt 577
Query: 541 agaggaacaggatctataaaggatccagacaaggaagagaagttaagaggaaaaccaggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 agaggaacaggatctataaaggatccagacaaggaagagaagttaagaggaaaaccaggc 637
Query: 601 tatgagcatctctatgagccgctccacatattgatcgaggctgatttacctgctaatatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tatgagcatctctatgagccgctccacatattgatcgaggctgatttacctgctaatatt 697
Query: 661 gttgacatcaggcttaggcaggctcaggaaatcatagaagaactgctcaaacctgtcgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gttgacatcaggcttaggcaggctcaggaaatcatagaagaactgctcaaacctgtcgat 757
Query: 721 gagtcacaggactatgtcaagaagcagcagttgcgggaattagcattgctgaattcaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gagtcacaggactatgtcaagaagcagcagttgcgggaattagcattgctgaattcaaat 817
Query: 781 ttaagagaagagagtcctgggccaagtggtagtgtatctccatttaattctggtggaatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ttaagagaagagagtcctgggccaagtggtagtgtatctccatttaattctggtggaatg 877
Query: 841 aaaagagcaaaaactggcagatga 864
||||||||||||||||||||||||
Sbjct: 878 aaaagagcaaaaactggcagatga 901
>gnl|LJGI|TC67660 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 663
Score = 464 bits (234), Expect = e-130
Identities = 404/458 (88%), Gaps = 2/458 (0%)
Strand = Plus / Plus
Query: 111 agagttgctggcagagcgtcaaaagcttggacctttcatgcaagtgcttcctacatgcaa 170
||||||||||||||||| ||||||||||||||| || | ||||||||||| | ||||||
Sbjct: 203 agagttgctggcagagcatcaaaagcttggaccctttacacaagtgcttcccatatgcaa 262
Query: 171 tcgcctcttgaatcaagaaatattaagagtctctggaatgttgtccaatcaaggttttgg 230
||||| | |||||||||||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 263 ccgcctgataaatcaagaaatattaagagtttctagaatgttgtccaaccaaggttttgg 322
Query: 231 tgactttgatagactgcggcatagaagccctagtcctatggctccttcgaacctcatgtc 290
||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||
Sbjct: 323 tgactttgatagactgcggcatagaagccctagtcctatggcttcttcaaacatcatgtc 382
Query: 291 taatgtccctgggacaggattgggtggatggaatggtcttcagcaggagagattatgtgg 350
|||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 383 aaatgtcagtgggacaggtttgggtggatggaatagtcttcagcaggagagatttagtgg 442
Query: 351 aactcctggaatgacaatggactggcaagttgcccctgcaagtcctacttcatacactgt 410
| | ||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 443 accccctggaatgacaatggactggcaaggtgcccctgcaagccctagttcatttactgt 502
Query: 411 tagaaggatattacgcttggaaattcctgttgatacattccc-caatttcaattttg-tt 468
|| || || || ||| |||||||||| || ||||||| ||| ||||||||||||| ||
Sbjct: 503 taagagaatcttgcgcctggaaattccagtagatacatacccgtaatttcaattttgttt 562
Query: 469 ggaagacttctgggacctagaggcaattctctgaaacgggtagaagcaacaacaggttgc 528
|||| ||||||||||||||||||||||||| |||||||||||||||| || || ||||||
Sbjct: 563 ggaacacttctgggacctagaggcaattctttgaaacgggtagaagctactactggttgc 622
Query: 529 agggtgtttattagaggaacaggatctataaaggatcc 566
| || | ||||||||||| |||||| |||||||||||
Sbjct: 623 cgtgtatatattagaggaaaaggatccataaaggatcc 660
>gnl|LJGI|TC79709 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 421
Score = 212 bits (107), Expect = 3e-54
Identities = 168/187 (89%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 111 agagttgctggcagagcgtcaaaagcttggacctttcatgca-agtgcttcctacatgca 169
||||||||||||||||| ||||||||||||||| || | || ||||||||| | |||||
Sbjct: 235 agagttgctggcagagcatcaaaagcttggaccctttacacacagtgcttcccatatgca 294
Query: 170 atcgcctcttgaatcaagaaatattaagagtctctggaatgttgtccaatcaaggttttg 229
| ||||| | |||||||||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 295 accgcctgataaatcaagaaatattaagagtttctagaatgttgtccaaccaaggttttg 354
Query: 230 gtgactttgatagactgcggcatagaagccctagtcctatggctccttcgaacctcatgt 289
|||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||
Sbjct: 355 gtgactttgatagactgcggcatagaagccctagtcctatggcttcttcaaacatcatgt 414
Query: 290 ctaatgt 296
| |||||
Sbjct: 415 caaatgt 421
>gnl|LJGI|TC67728 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1450
Score = 95.6 bits (48), Expect = 4e-19
Identities = 222/280 (79%)
Strand = Plus / Plus
Query: 454 aatttcaattttgttggaagacttctgggacctagaggcaattctctgaaacgggtagaa 513
||||||||||| ||||| || ||||| || ||| | || ||||| ||||| || || ||
Sbjct: 610 aatttcaatttcgttgggaggcttcttggccctcggggtaattcactgaagcgagtcgag 669
Query: 514 gcaacaacaggttgcagggtgtttattagaggaacaggatctataaaggatccagacaag 573
|| || ||||||||| | || ||||||||||| ||| || ||||| || ||||| |||
Sbjct: 670 gctaccacaggttgccgtgtatttattagagggcaaggttcaataaaagacccagataag 729
Query: 574 gaagagaagttaagaggaaaaccaggctatgagcatctctatgagccgctccacatattg 633
|||||| ||||| ||||| |||||||||||||| || |||| || || ||| | |||
Sbjct: 730 gaagaggttttaaggggaaagccaggctatgagcacctgaatgaaccactgcacgttttg 789
Query: 634 atcgaggctgatttacctgctaatattgttgacatcaggcttaggcaggctcaggaaatc 693
|| |||||||| |||||| ||| ||||||| || ||||| ||||| || || ||||||
Sbjct: 790 attgaggctgaactacctgtcaatgttgttgatataaggctgaggcaagcacaagaaatc 849
Query: 694 atagaagaactgctcaaacctgtcgatgagtcacaggact 733
|||||| | || |||||||| | |||||| |||||||||
Sbjct: 850 atagaaaatctactcaaacccgcggatgagacacaggact 889
>gnl|LJGI|TC72746 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 678
Score = 54.0 bits (27), Expect = 1e-06
Identities = 108/135 (80%)
Strand = Plus / Plus
Query: 567 agacaaggaagagaagttaagaggaaaaccaggctatgagcatctctatgagccgctcca 626
|||||||||||| |||||| |||| || ||||||||||| || ||| ||||| ||
Sbjct: 64 agacaaggaagacttgttaaggggaaggccgggctatgagcacctgagtgaaccgcttca 123
Query: 627 catattgatcgaggctgatttacctgctaatattgttgacatcaggcttaggcaggctca 686
||| ||||| || ||||| ||||||| ||||||||||| | ||| | ||||| || ||
Sbjct: 124 cattttgattgaagctgagctacctgccaatattgttgatgtaaggttgaggcaagcaca 183
Query: 687 ggaaatcatagaaga 701
||||||||| |||||
Sbjct: 184 ggaaatcatcgaaga 198