Miyakogusa Predicted Gene
- Lj1g3v2534980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2534980.1 tr|B9HFB2|B9HFB2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_820063 PE=4
SV=1,76.19,4e-17,seg,NULL,NODE_62345_length_361_cov_79.789474.path1.1
(195 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61202 387 e-107
gnl|LJGI|TC58914 305 5e-83
gnl|LJGI|GO035866 228 1e-59
>gnl|LJGI|TC61202
Length = 792
Score = 387 bits (195), Expect = e-107
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1 atgaggcagcaccgtgcctttatattggctgaaaggaagaaaaggaaagctcagatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atgaggcagcaccgtgcctttatattggctgaaaggaagaaaaggaaagctcagatgcaa 530
Query: 61 gaggctaaccggaagaaaagcattaagagagtagagcgtaaaatggctgcagttgcaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gaggctaaccggaagaaaagcattaagagagtagagcgtaaaatggctgcagttgcaagg 590
Query: 121 gaaagagcgtgggcagagaggctggctgaattgcagcgacttgagaaagagaagaaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gaaagagcgtgggcagagaggctggctgaattgcagcgacttgagaaagagaagaaaaat 650
Query: 181 tctatggcttaattt 195
|||||||||||||||
Sbjct: 651 tctatggcttaattt 665
>gnl|LJGI|TC58914
Length = 805
Score = 305 bits (154), Expect = 5e-83
Identities = 184/194 (94%)
Strand = Plus / Plus
Query: 2 tgaggcagcaccgtgcctttatattggctgaaaggaagaaaaggaaagctcagatgcaag 61
||||||||||||| |||||| ||||||| || ||||||||||||||||||||| ||||||
Sbjct: 504 tgaggcagcaccgagcctttgtattggcggagaggaagaaaaggaaagctcagctgcaag 563
Query: 62 aggctaaccggaagaaaagcattaagagagtagagcgtaaaatggctgcagttgcaaggg 121
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 aggctaaccggaagaaaagcattaagaaggtagagcgtaaaatggctgcagttgcaaggg 623
Query: 122 aaagagcgtgggcagagaggctggctgaattgcagcgacttgagaaagagaagaaaaatt 181
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 624 aaagagagtgggcagagaggctggctgaattgcaacgacttgagaaagagaagaaaaatt 683
Query: 182 ctatggcttaattt 195
|||| |||||||||
Sbjct: 684 ctattgcttaattt 697
>gnl|LJGI|GO035866
Length = 759
Score = 228 bits (115), Expect = 1e-59
Identities = 160/171 (93%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 2 tgaggcagcaccgtgcctttatattggctgaaaggaagaaaaggaaagctcagatgcaag 61
||||||||||||| |||||| ||||||| || ||||||||| ||||||||||| ||||||
Sbjct: 517 tgaggcagcaccgagcctttgtattggcggagaggaagaaa-ggaaagctcagctgcaag 575
Query: 62 aggctaaccggaagaaaagcattaagagagtagagcgtaaaatggctgcagttgcaaggg 121
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 576 aggctaaccggaagaaaagcattaagaaggtagagcgtaaaatggctgcagttgcaaggg 635
Query: 122 aaagagcgtgggcagagaggctggctgaattgcagcgacttgagaaagaga 172
|||||| |||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 636 aaagagagtgggcagagaggctggctg-attgca-cgacttgagaaagaga 684