Miyakogusa Predicted Gene

Lj1g3v2534940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2534940.1 Non Chatacterized Hit- tr|F6H477|F6H477_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,54.55,0.0000005,seg,NULL; Malectin_like,Malectin-like
carbohydrate-binding domain,gene.g33187.t1.1
         (746 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76239 weakly similar to UniRef100_A7U519 Cluster: FER...   141   7e-33

>gnl|LJGI|TC76239 weakly similar to UniRef100_A7U519 Cluster: FERONIA receptor-like
           kinase; n=1; Arabidopsis lyrata|Rep: FERONIA
           receptor-like kinase - Arabidopsis lyrata (Lyre-leaved
           rock-cress), partial (9%)
          Length = 588

 Score =  141 bits (71), Expect = 7e-33
 Identities = 98/107 (91%)
 Strand = Plus / Plus

                                                                       
Query: 380 acttctacccttcttcctacggcggcctcaacatctccgacgctctgttcaccgtcacca 439
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 45  acttctaccgttcttcctacggcggcctcaacatctccaacgctctgttcaccgtcacca 104

                                                          
Query: 440 cacagtcctacaccctgctcaacaacttcagcgccgccatgcaagac 486
           | ||||||| ||| ||| | |||||||||||| |||||||| |||||
Sbjct: 105 cgcagtcctccactctgttgaacaacttcagccccgccatggaagac 151