Miyakogusa Predicted Gene
- Lj1g3v2482420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2482420.1 Non Chatacterized Hit- tr|C5YZS8|C5YZS8_SORBI
Putative uncharacterized protein Sb09g023470
OS=Sorghu,31.14,2e-17,seg,NULL,CUFF.29058.1
(1146 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60734 weakly similar to UniRef100_Q1EPA3 Cluster: Pro... 607 e-173
gnl|LJGI|TC73855 similar to UniRef100_Q2W2A9 Cluster: Periplasmi... 599 e-170
gnl|LJGI|TC71476 similar to UniRef100_A9TVS6 Cluster: Predicted ... 545 e-154
>gnl|LJGI|TC60734 weakly similar to UniRef100_Q1EPA3 Cluster: Protein kinase family
protein; n=1; Musa acuminata|Rep: Protein kinase family
protein - Musa acuminata (Banana), partial (7%)
Length = 726
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 1 atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 326
Query: 61 tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 386
Query: 121 gaaaatccaacaacaaagggttctccgccgccagcgtcaagtgagagaaaatcagatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaaaatccaacaacaaagggttctccgccgccagcgtcaagtgagagaaaatcagatcca 446
Query: 181 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 506
Query: 241 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 566
Query: 301 aaggag 306
||||||
Sbjct: 567 aaggag 572
Score = 75.8 bits (38), Expect = 5e-13
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 403 ggaagtgcaccacctccagtgcccnnnnnnnctgatgatggtggcaaggttcaggaaaa 461
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 668 ggaagtgcaccacctccagtgcccaaaaaaactgatgatggtggcaaggttcaggaaaa 726
>gnl|LJGI|TC73855 similar to UniRef100_Q2W2A9 Cluster: Periplasmic protein TonB,
links inner and outer membranes; n=1; Magnetospirillum
magneticum AMB-1|Rep: Periplasmic protein TonB, links
inner and outer membranes - Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264), partial (10%)
Length = 734
Score = 599 bits (302), Expect = e-170
Identities = 305/306 (99%)
Strand = Plus / Plus
Query: 1 atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 362
Query: 61 tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 422
Query: 121 gaaaatccaacaacaaagggttctccgccgccagcgtcaagtgagagaaaatcagatcca 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaaatccaacaacaaagggttccccgccgccagcgtcaagtgagagaaaatcagatcca 482
Query: 181 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 542
Query: 241 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 602
Query: 301 aaggag 306
||||||
Sbjct: 603 aaggag 608
Score = 60.0 bits (30), Expect = 3e-08
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 403 ggaagtgcaccacctccagtgcccnnnnnnnctgatgatggtggcaaggtt 453
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 684 ggaagtgcaccacctccagtgcccaaaaaaactgatgatggtggcaaggtt 734
>gnl|LJGI|TC71476 similar to UniRef100_A9TVS6 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(6%)
Length = 586
Score = 545 bits (275), Expect = e-154
Identities = 281/283 (99%)
Strand = Plus / Plus
Query: 864 catattcacagtactggtctttggagggatatgggcatgttgcatgttcaggaagaagcg 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catattcacagtactggtctttggagggatatgggcatgttgcatgttcaggaagaagcg 60
Query: 924 acccgatgagatcccgtatcaagagcttgaaatggcactgccggtgtctgcttcagctac 983
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 acccgatgagatcccgtatcaagagcttgaaatggcactgccggtgtttgcttcagctac 120
Query: 984 caatgtggaatctgctgaaggttgggatcagggatgggatgatgattgggatgacaacgt 1043
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatgtggaatttgctgaaggttgggatcagggatgggatgatgattgggatgacaacgt 180
Query: 1044 ggcggtgaagtcaccgggagcagtgcgtggcatctcggcaaatggccttacttctagatc 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcggtgaagtcaccgggagcagtgcgtggcatctcggcaaatggccttacttctagatc 240
Query: 1104 tgcaaacaaagatggatgggataataactgggatgaatagtta 1146
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcaaacaaagatggatgggataataactgggatgaatagtta 283