Miyakogusa Predicted Gene

Lj1g3v2482420.1
Show Alignment: 
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2482420.1 Non Chatacterized Hit- tr|C5YZS8|C5YZS8_SORBI
Putative uncharacterized protein Sb09g023470
OS=Sorghu,31.14,2e-17,seg,NULL,CUFF.29058.1
         (1146 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60734 weakly similar to UniRef100_Q1EPA3 Cluster: Pro...   607   e-173
gnl|LJGI|TC73855 similar to UniRef100_Q2W2A9 Cluster: Periplasmi...   599   e-170
gnl|LJGI|TC71476 similar to UniRef100_A9TVS6 Cluster: Predicted ...   545   e-154

>gnl|LJGI|TC60734 weakly similar to UniRef100_Q1EPA3 Cluster: Protein kinase family
           protein; n=1; Musa acuminata|Rep: Protein kinase family
           protein - Musa acuminata (Banana), partial (7%)
          Length = 726

 Score =  607 bits (306), Expect = e-173
 Identities = 306/306 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 326

                                                                       
Query: 61  tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 386

                                                                       
Query: 121 gaaaatccaacaacaaagggttctccgccgccagcgtcaagtgagagaaaatcagatcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaaaatccaacaacaaagggttctccgccgccagcgtcaagtgagagaaaatcagatcca 446

                                                                       
Query: 181 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 506

                                                                       
Query: 241 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 566

                 
Query: 301 aaggag 306
           ||||||
Sbjct: 567 aaggag 572



 Score = 75.8 bits (38), Expect = 5e-13
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 403 ggaagtgcaccacctccagtgcccnnnnnnnctgatgatggtggcaaggttcaggaaaa 461
           ||||||||||||||||||||||||       ||||||||||||||||||||||||||||
Sbjct: 668 ggaagtgcaccacctccagtgcccaaaaaaactgatgatggtggcaaggttcaggaaaa 726


>gnl|LJGI|TC73855 similar to UniRef100_Q2W2A9 Cluster: Periplasmic protein TonB,
           links inner and outer membranes; n=1; Magnetospirillum
           magneticum AMB-1|Rep: Periplasmic protein TonB, links
           inner and outer membranes - Magnetospirillum magneticum
           (strain AMB-1 / ATCC 700264), partial (10%)
          Length = 734

 Score =  599 bits (302), Expect = e-170
 Identities = 305/306 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atggaaagaagacacgcgttactggcgtttttgttgttgtctctgatcgtgtttgatgtt 362

                                                                       
Query: 61  tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctgatgcttcctttgttaaggacattagaaagttggtctctttggatccaaaagatcaa 422

                                                                       
Query: 121 gaaaatccaacaacaaagggttctccgccgccagcgtcaagtgagagaaaatcagatcca 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaaatccaacaacaaagggttccccgccgccagcgtcaagtgagagaaaatcagatcca 482

                                                                       
Query: 181 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaaggtggtgatgaaacaaaagtaaagaaagacattccaccttccactagtaataatgat 542

                                                                       
Query: 241 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 accaccccagttccacaaccacaaccttcacacaaggtggagagtgagaatggtactaaa 602

                 
Query: 301 aaggag 306
           ||||||
Sbjct: 603 aaggag 608



 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 403 ggaagtgcaccacctccagtgcccnnnnnnnctgatgatggtggcaaggtt 453
           ||||||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 684 ggaagtgcaccacctccagtgcccaaaaaaactgatgatggtggcaaggtt 734


>gnl|LJGI|TC71476 similar to UniRef100_A9TVS6 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (6%)
          Length = 586

 Score =  545 bits (275), Expect = e-154
 Identities = 281/283 (99%)
 Strand = Plus / Plus

                                                                        
Query: 864  catattcacagtactggtctttggagggatatgggcatgttgcatgttcaggaagaagcg 923
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    catattcacagtactggtctttggagggatatgggcatgttgcatgttcaggaagaagcg 60

                                                                        
Query: 924  acccgatgagatcccgtatcaagagcttgaaatggcactgccggtgtctgcttcagctac 983
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61   acccgatgagatcccgtatcaagagcttgaaatggcactgccggtgtttgcttcagctac 120

                                                                        
Query: 984  caatgtggaatctgctgaaggttgggatcagggatgggatgatgattgggatgacaacgt 1043
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  caatgtggaatttgctgaaggttgggatcagggatgggatgatgattgggatgacaacgt 180

                                                                        
Query: 1044 ggcggtgaagtcaccgggagcagtgcgtggcatctcggcaaatggccttacttctagatc 1103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ggcggtgaagtcaccgggagcagtgcgtggcatctcggcaaatggccttacttctagatc 240

                                                       
Query: 1104 tgcaaacaaagatggatgggataataactgggatgaatagtta 1146
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgcaaacaaagatggatgggataataactgggatgaatagtta 283