Miyakogusa Predicted Gene
- Lj1g3v2461220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2461220.1 Non Chatacterized Hit- tr|I1N372|I1N372_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41267 PE,80,0,seg,NULL;
coiled-coil,NULL,CUFF.29100.1
(2634 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70520 similar to UniRef100_A7QFL4 Cluster: Chromosome... 1191 0.0
gnl|LJGI|BW598451 959 0.0
gnl|LJGI|BP042054 UniRef100_A6LTW7 Cluster: Primosome DnaD subu... 103 6e-21
>gnl|LJGI|TC70520 similar to UniRef100_A7QFL4 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 1004
Score = 1191 bits (601), Expect = 0.0
Identities = 624/634 (98%)
Strand = Plus / Plus
Query: 2001 gtccccattgtcccgagagaagcataactgttctaattggttttcaagtacccccaaggg 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtccccattgtcccgagagaagcataactgttctaattggttttcaagtacccccaaggg 60
Query: 2061 ccaagacatgcattcttcttttatggatgatgcagctgcaagtgagaaaggaacatggca 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaagacatgcattcttcttttatggatgatgcagctgcaagtgagaaaggaacatggca 120
Query: 2121 gatgtggagtacttcaccgcttggtcaggaaggtttaggcttggttgggggcccaggaag 2180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgtggagtacttcaccgcttggtcaggaaggtttaggcttggttgggggcccaggaag 180
Query: 2181 ctggctatcctcacaaatgaacataccaaccaaggacgattttgtgcttccgtcatctca 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggctatcctcacaaatgaacataccaaccaaggacgattttgtgcttccgtcatctca 240
Query: 2241 aaacactatggcttcnnnnnnnaacaaagatgataacataatttccagcaaccattcttc 2300
||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 241 aaacactatggcttctttttttaacaaagatgataacataatttccggcaaccattcttc 300
Query: 2301 tcaaaatgtttttgtccctaatgttcatagtggcagtaacttcagccctgttactgtctc 2360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaaaatgtttttgtccctaatgttcatagtggcagtaacttcagccctgttactgtctc 360
Query: 2361 aagtagttatgatccttggttacagagtgctttattcccgccattgtcaaccggctttac 2420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagtagttatgatccttggttacagagtgctttattcccgccattgtcaaccggctttac 420
Query: 2421 agctcaggaggcggctactcagaatgaaattatatatggaagtcccagtgcatctgttag 2480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agctcaggaggcggctactcagaatgaaattatatatggaagtcccagtgcatctgttag 480
Query: 2481 tagccatgtgcttgagggttctccggctaacagttggtccaaaaaggaatggcctataca 2540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 481 tagccatgtgcttgagggttctccggctaacagttggtccaaagaggaatggcctataca 540
Query: 2541 tggttctgcggaaagtgtagggaagccatcatctgtttcaaagacccatgatggtctaca 2600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggttctgcggaaagtgtagggaagccatcatctgtttcaaagacccatgatggtctaca 600
Query: 2601 tccaacctcagatttacagtcaatttggtaattt 2634
||||||||||||| ||||||||||||||||||||
Sbjct: 601 tccaacctcagatgtacagtcaatttggtaattt 634
>gnl|LJGI|BW598451
Length = 486
Score = 959 bits (484), Expect = 0.0
Identities = 484/484 (100%)
Strand = Plus / Plus
Query: 1291 attttatcctcttccaaagcatttggctttggaaggggtactaatgtatctgccactgtg 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 attttatcctcttccaaagcatttggctttggaaggggtactaatgtatctgccactgtg 62
Query: 1351 gcaaaggacaacaagttaagcagttctgtagatcattttcatactgctgccagcaggaga 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gcaaaggacaacaagttaagcagttctgtagatcattttcatactgctgccagcaggaga 122
Query: 1411 gatatttgtcctcctgaacgtccaactgcaaaatccaacttgaatgctgatgataggaat 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gatatttgtcctcctgaacgtccaactgcaaaatccaacttgaatgctgatgataggaat 182
Query: 1471 attaataactctgtactcccagaaccacagccatggagagcacctataatgtcatggcag 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attaataactctgtactcccagaaccacagccatggagagcacctataatgtcatggcag 242
Query: 1531 caattattcactcgatctccaactgtacctcaatcctcaaattcaaacgtaatatgtaga 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 caattattcactcgatctccaactgtacctcaatcctcaaattcaaacgtaatatgtaga 302
Query: 1591 ccaaattccaaagttcaagttgaaaccaaaagccctcagtcatcaggccagtcaccagtt 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccaaattccaaagttcaagttgaaaccaaaagccctcagtcatcaggccagtcaccagtt 362
Query: 1651 acacaatcatttaataatccaattcacttcggtcttccatcaccgttcaaaatttccact 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acacaatcatttaataatccaattcacttcggtcttccatcaccgttcaaaatttccact 422
Query: 1711 catccaaatggatcaaccagtactagtcttggtttctctcctgcaattgagccattattc 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 catccaaatggatcaaccagtactagtcttggtttctctcctgcaattgagccattattc 482
Query: 1771 tctc 1774
||||
Sbjct: 483 tctc 486
>gnl|LJGI|BP042054 UniRef100_A6LTW7 Cluster: Primosome DnaD subunit; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Primosome DnaD, partial
(4%)
Length = 406
Score = 103 bits (52), Expect = 6e-21
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 2438 ctcagaatgaaattatatatggaagtcccagtgcatctgttagtagccatgtgcttgagg 2497
||||||||||||| ||||| | ||||| |||| ||||| ||| || | ||||| ||||
Sbjct: 354 ctcagaatgaaatgatatacaggagtccaagtggatctgctagcagtcgtgtgcatgagt 295
Query: 2498 gttctccggctaacagttggtccaaaaaggaatggcctatacatggttctgcggaaagtg 2557
|||||| ||||| | || | ||||||| ||||||||| |||||||||||| |||||| |
Sbjct: 294 tttctccagctaaaattttgcccaaaaatgaatggcctgtacatggttctgtggaaagcg 235
Query: 2558 tagggaagccatcatctgtttcaaagacccatgatg 2593
| |||||| ||||||||||||||| | |||||||||
Sbjct: 234 ttgggaagtcatcatctgtttcaaggccccatgatg 199