Miyakogusa Predicted Gene
- Lj1g3v2447050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2447050.1 CUFF.29030.1
(2634 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP042054 UniRef100_A6LTW7 Cluster: Primosome DnaD subu... 517 e-145
gnl|LJGI|BW598451 192 8e-48
gnl|LJGI|TC70520 similar to UniRef100_A7QFL4 Cluster: Chromosome... 157 4e-37
>gnl|LJGI|BP042054 UniRef100_A6LTW7 Cluster: Primosome DnaD subunit; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Primosome DnaD, partial
(4%)
Length = 406
Score = 517 bits (261), Expect = e-145
Identities = 261/261 (100%)
Strand = Plus / Minus
Query: 2374 cagagtactttcttcccacagttgtctagttgccttaaagctcaggagagtgctcagaat 2433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cagagtactttcttcccacagttgtctagttgccttaaagctcaggagagtgctcagaat 347
Query: 2434 gaaatgatatacaggagtccaagtggatctgctagcagtcgtgtgcatgagttttctcca 2493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaaatgatatacaggagtccaagtggatctgctagcagtcgtgtgcatgagttttctcca 287
Query: 2494 gctaaaattttgcccaaaaatgaatggcctgtacatggttctgtggaaagcgttgggaag 2553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gctaaaattttgcccaaaaatgaatggcctgtacatggttctgtggaaagcgttgggaag 227
Query: 2554 tcatcatctgtttcaaggccccatgatgtcggtgtgcatccaacctcggatgcaaagtca 2613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tcatcatctgtttcaaggccccatgatgtcggtgtgcatccaacctcggatgcaaagtca 167
Query: 2614 ttttggttaaatagacagtag 2634
|||||||||||||||||||||
Sbjct: 166 ttttggttaaatagacagtag 146
>gnl|LJGI|BW598451
Length = 486
Score = 192 bits (97), Expect = 8e-48
Identities = 380/473 (80%), Gaps = 6/473 (1%)
Strand = Plus / Plus
Query: 1297 attttgtcttcttcaaaagcatttggttttggaagaggtgctaatgttcccaccactgtg 1356
||||| || ||||| ||||||||||| |||||||| ||| ||||||| | ||||||||
Sbjct: 3 attttatcctcttccaaagcatttggctttggaaggggtactaatgtatctgccactgtg 62
Query: 1357 gtgaaagaaagcaagttgaacagttctgtagatcatgttcatactgctgctagcaggaga 1416
| || || | |||||| | |||||||||||||||| ||||||||||||| |||||||||
Sbjct: 63 gcaaaggacaacaagttaagcagttctgtagatcattttcatactgctgccagcaggaga 122
Query: 1417 ggtacatgtcctcctgatcttccgatggctaaatccaatttaaatggagatgataggaat 1476
| || ||||||||||| | ||| | || |||||||| || |||| ||||||||||||
Sbjct: 123 gatatttgtcctcctgaacgtccaactgcaaaatccaacttgaatgctgatgataggaat 182
Query: 1477 actattcactcagttctcccagaaccaccacaggcatggactgaacctaaaaagtcatgg 1536
| || | |||| || |||||||| ||||||| |||||| | ||||| || |||||||
Sbjct: 183 attaataactctgtactcccaga---accacagccatggagagcacctataatgtcatgg 239
Query: 1537 cagcagttatttactcgttcatcatctgttccgaaatcctcaagttctaatgtaatatgc 1596
||||| ||||| ||||| || || |||| || ||||||||| ||| || ||||||||
Sbjct: 240 cagcaattattcactcgatctccaactgtacctcaatcctcaaattcaaacgtaatatgt 299
Query: 1597 agaccaaattccaaaagtcaa---gaagccaaaagccctcctttatctggccagttaccg 1653
||||||||||||||| |||| ||| |||||||||||| | ||| ||||||| |||
Sbjct: 300 agaccaaattccaaagttcaagttgaaaccaaaagccctcagtcatcaggccagtcacca 359
Query: 1654 ttcacagagtcatttaataatccaattcaatttggacttcaatcaccatttaatgtttct 1713
| ||| | |||||||||||||||||||| || || |||| |||||| || || ||||
Sbjct: 360 gttacacaatcatttaataatccaattcacttcggtcttccatcaccgttcaaaatttcc 419
Query: 1714 gcttttccaaatggatcaaccagttgtagtctaggttttactcctgccattga 1766
|| ||||||||||||||||||| |||||| ||||| ||||||| |||||
Sbjct: 420 actcatccaaatggatcaaccagtactagtcttggtttctctcctgcaattga 472
>gnl|LJGI|TC70520 similar to UniRef100_A7QFL4 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 1004
Score = 157 bits (79), Expect = 4e-37
Identities = 503/641 (78%), Gaps = 15/641 (2%)
Strand = Plus / Plus
Query: 1983 gtccccattgtcacgagaaaagcatagctattctaatcagtttcaaagtactccccaggc 2042
|||||||||||| ||||| ||||||| || ||||||| |||| |||||| ||| |||
Sbjct: 1 gtccccattgtcccgagagaagcataactgttctaattggttttcaagtacccccaaggg 60
Query: 2043 ccaagacacgcatgcatttcctatggatggtgtgtctgcaaatgagaagggaacatggca 2102
|||||||| |||| | | | |||||||| || |||||| |||||| |||||||||||
Sbjct: 61 ccaagacatgcattcttcttttatggatgatgcagctgcaagtgagaaaggaacatggca 120
Query: 2103 gatgtggagttcatcaccacttgttcaggaaagtttaggcttggttggtggctcaggaag 2162
|||||||||| | ||||| |||| ||||||| |||||||||||||||| ||| |||||||
Sbjct: 121 gatgtggagtacttcaccgcttggtcaggaaggtttaggcttggttgggggcccaggaag 180
Query: 2163 ctggcttttatcttcacaaaggaacttacccaactatgttgactctgtacttccatcacc 2222
||||| |||| ||||||| |||| |||| | | | | || | ||| ||||| ||| |
Sbjct: 181 ctggc---tatcctcacaaatgaacataccaaccaaggacgattttgtgcttccgtcatc 237
Query: 2223 tcagaagactattgcttctgtttttgacgaagacaatagcataatttctagtactcattc 2282
||| || ||||| |||||| ||||| || |||| ||| ||||||||| | | |||||
Sbjct: 238 tcaaaacactatggcttctttttttaacaaagatgataacataatttccggcaaccattc 297
Query: 2283 tccacaaaatattttccttcctaatggtcgtaagagtggcgggaccatcagccctattac 2342
| | |||||| |||| | ||||||| || | |||||| | | | |||||||| ||||
Sbjct: 298 ttctcaaaatgtttttgtccctaatgttc---atagtggcagtaacttcagccctgttac 354
Query: 2343 ttgttcaagtggttatgagccttggttacaacagagtactttcttcccacagttgtctag 2402
| |||||| ||||||| |||||||| ||||||| |||| ||||| | ||||| |
Sbjct: 355 tgtctcaagtagttatgatccttggtt---acagagtgctttattcccgccattgtcaac 411
Query: 2403 ttgccttaaagctcagga---gagtgctcagaatgaaatgatatacaggagtccaagtgg 2459
|| ||| ||||||||| | | ||||||||||||| ||||| | ||||| ||||
Sbjct: 412 cggctttacagctcaggaggcggctactcagaatgaaattatatatggaagtcccagtgc 471
Query: 2460 atctgctagcagtcgtgtgcatgagttttctccagctaaaattttgcccaaaaatgaatg 2519
||||| ||| || | ||||| |||| |||||| ||||| | || | ||||| | |||||
Sbjct: 472 atctgttagtagccatgtgcttgagggttctccggctaacagttggtccaaagaggaatg 531
Query: 2520 gcctgtacatggttctgtggaaagcgttgggaagtcatcatctgtttcaaggccccatga 2579
|||| |||||||||||| |||||| || |||||| ||||||||||||||| | |||||||
Sbjct: 532 gcctatacatggttctgcggaaagtgtagggaagccatcatctgtttcaaagacccatga 591
Query: 2580 tgtcggtgtgcatccaacctcggatgcaaagtcattttggt 2620
| ||| | ||||||||||| |||| | ||||| ||||||
Sbjct: 592 t---ggtctacatccaacctcagatgtacagtcaatttggt 629