Miyakogusa Predicted Gene
- Lj1g3v2431850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2431850.1 Non Chatacterized Hit- tr|D8T5D2|D8T5D2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,26.36,2e-18,FAMILY NOT NAMED,NULL; PPR_2,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; seg,NULL; PPR: ,CUFF.29016.1
(1509 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328451 weakly similar to UniRef100_A7QFI8 Cluster: Ch... 1296 0.0
gnl|LJGI|FS354787 weakly similar to UniRef100_A7QFI8 Cluster: Ch... 722 0.0
>gnl|LJGI|FS328451 weakly similar to UniRef100_A7QFI8 Cluster: Chromosome chr8
scaffold_88, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 771
Score = 1296 bits (654), Expect = 0.0
Identities = 654/654 (100%)
Strand = Plus / Plus
Query: 1 atggtgagacaccctttatccaaaactgccaacaaatacctcagaaaattcagaaaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggtgagacaccctttatccaaaactgccaacaaatacctcagaaaattcagaaaatgg 177
Query: 61 ccacactctccttacaagacctcatggcaccacaactttggtgaacaacaagctatgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ccacactctccttacaagacctcatggcaccacaactttggtgaacaacaagctatgaac 237
Query: 121 attctcataaaacaagcagcaaccattgaaacatgttcctcttcctcccaacaaatccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 attctcataaaacaagcagcaaccattgaaacatgttcctcttcctcccaacaaatccaa 297
Query: 181 acacagaacaacaacccttttctcctttctactctcattgactccttcaaatcttatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acacagaacaacaacccttttctcctttctactctcattgactccttcaaatcttatagc 357
Query: 241 tgtgacccaactccaaatgcttactactttctcatcaaaaccttagtcaacacctcccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgtgacccaactccaaatgcttactactttctcatcaaaaccttagtcaacacctcccat 417
Query: 301 ttgcaggacattcctcctgttctcgaccaccttgaacgcgtggagaagtttgaaacacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttgcaggacattcctcctgttctcgaccaccttgaacgcgtggagaagtttgaaacacct 477
Query: 361 gagttcatctttgtgtaccttattagattctatggtcttgctgataggatccaagatgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gagttcatctttgtgtaccttattagattctatggtcttgctgataggatccaagatgct 537
Query: 421 gttgatttgttcttcagaatccccaggttcaggtgcacaccaactgtttgttctttgaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gttgatttgttcttcagaatccccaggttcaggtgcacaccaactgtttgttctttgaac 597
Query: 481 ttgttgctgtcattgctttgtaggaagagggagtgcctcagaatggttccccagatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttgttgctgtcattgctttgtaggaagagggagtgcctcagaatggttccccagatcttg 657
Query: 541 ttaaagagccagcacatgaaaattcgcattgaggagtcgacttttcgggttttgatcagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ttaaagagccagcacatgaaaattcgcattgaggagtcgacttttcgggttttgatcagt 717
Query: 601 gccttgtgcagaattaggagagtggattatgctgttaagatactgaattgtatg 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gccttgtgcagaattaggagagtggattatgctgttaagatactgaattgtatg 771
>gnl|LJGI|FS354787 weakly similar to UniRef100_A7QFI8 Cluster: Chromosome chr8
scaffold_88, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 709
Score = 722 bits (364), Expect = 0.0
Identities = 367/368 (99%)
Strand = Plus / Minus
Query: 1142 aggccggagatttaagtaaggctaagggggtaatgaaggagatggggttgaaaggtgttg 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aggccggagatttaagtaaggctaagggggtaatgaaggagatggggttgaaaggtgttg 650
Query: 1202 agctcaacttgcatacatacaggattatgcttgatggtttggttggtaaagctgagattg 1261
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 649 agctcaacttgcatacatacaggatcatgcttgatggtttggttggtaaagctgagattg 590
Query: 1262 gtgaagcatctcttttgttggaggaaatgttgaagaagtgtttttatcctagatcttcaa 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gtgaagcatctcttttgttggaggaaatgttgaagaagtgtttttatcctagatcttcaa 530
Query: 1322 catttgataatatcatatgttgcatgtgccaaaagggcttaattaacgaagcactagaat 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 catttgataatatcatatgttgcatgtgccaaaagggcttaattaacgaagcactagaat 470
Query: 1382 tgatgaagaaaattgttgcaaaaagttttgctccaggagccagggcctgggaagctctgc 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tgatgaagaaaattgttgcaaaaagttttgctccaggagccagggcctgggaagctctgc 410
Query: 1442 ttcttcattcgggatctgatctcacatattcagaaaccacgtttgctggcttgttcaacc 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttcttcattcgggatctgatctcacatattcagaaaccacgtttgctggcttgttcaacc 350
Query: 1502 aaaattaa 1509
||||||||
Sbjct: 349 aaaattaa 342