Miyakogusa Predicted Gene
- Lj1g3v2418700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2418700.1 tr|G7KW01|G7KW01_MEDTR D-alanine--D-alanine
ligase OS=Medicago truncatula GN=MTR_7g071990 PE=4
SV=1,82.79,0,SUBFAMILY NOT NAMED,NULL; D-ALANINE--D-ALANINE
LIGASE,D-alanine--D-alanine ligase; PreATP-grasp doma,CUFF.29126.1
(2829 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62154 similar to UniRef100_A7QFI6 Cluster: Chromosome... 983 0.0
gnl|LJGI|TC58905 similar to UniRef100_A7QFI6 Cluster: Chromosome... 839 0.0
gnl|LJGI|BP052728 similar to UniRef100_A7QFI6 Cluster: Chromosom... 458 e-128
>gnl|LJGI|TC62154 similar to UniRef100_A7QFI6 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 719
Score = 983 bits (496), Expect = 0.0
Identities = 508/512 (99%)
Strand = Plus / Plus
Query: 2318 tcttgatctttgaacctttcatagagacagatgaaatagttgtgacatccaaatttaagg 2377
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgatctttgaacctttcgtagagacagatgaaatagttgtgacatccaaatttaagg 60
Query: 2378 agactggtcatgacctcatgtggaaagggcacagtagatgggtggaaataacagttggtg 2437
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agactgggcatgacctcatgtggaaagggcacagtagatgggtggaaataacagttggtg 120
Query: 2438 tcataggaaaacgtggatcaatgcactcgctaagtcctagtgtaaccgtcaaagaaactg 2497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcataggaaaacgtggatcaatgcactcgctaagtcctagtgtaaccgtcaaagaaactg 180
Query: 2498 gcgatattttgtcattggaggagaaattccaaggtgggactggcatcaatctgactccac 2557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgatattttgtcattggaggagaaattccaaggtgggactggcatcaatctgactccac 240
Query: 2558 ctccgttgtcgatcatgagtgagaaagctttgcagagatgtaaaaagcatattgaacaga 2617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctccgttgtcgatcatgagtgagaaagctttgcagagatgtaaaaagcatattgaacaga 300
Query: 2618 ttgcaaacaccctacaattagaaggattttcacgtattgatgcatttgtcaatgttgaca 2677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgcaaacaccctacaattagaaggattttcacgtattgatgcatttgtcaatgttgaca 360
Query: 2678 acggagaggttttgattatagagataaatactgtgcccggaatgacaccttccactgttc 2737
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 361 acggagaggttttgattatagaggtaaatactgtgcccggaatgacaccttccactgttc 420
Query: 2738 tgattcatcaggcactggcggaacaaccaccattgtatcctcatcagttcttccgtacgc 2797
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgattcatcaggcactggtggaacaaccaccattgtatcctcatcagttcttccgtacgc 480
Query: 2798 ttcttgatttgggatctgtaaggtctatgtaa 2829
||||||||||||||||||||||||||||||||
Sbjct: 481 ttcttgatttgggatctgtaaggtctatgtaa 512
>gnl|LJGI|TC58905 similar to UniRef100_A7QFI6 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 795
Score = 839 bits (423), Expect = 0.0
Identities = 429/431 (99%)
Strand = Plus / Plus
Query: 258 ttctgctagatcagttcttgatcacttgcagggagatgatatacatgtgagctgctatta 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttctgctagatcagttcttgatcacttgcagggagatgatatacatgtgagctgctatta 424
Query: 318 tattgatatcaatctcaacgcatttgcaatttcttctgctcaggtatattccaacacccc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tattgatatcaatctcaacgcatttgcaatttcttctgctcaggtatattccaacacccc 484
Query: 378 tgctgattttgattttaaactagaaagccttgcccaaagtttctcgactttggatgacat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgctgattttgattttaaactagaaagccttgcccaaagtttctcgactttggatgacat 544
Query: 438 ggcagagcatctagctacatctgtggacatagtctttccagttatacatggtcaatttgg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggcagagcatctagctacatctgtggacatagtctttccagttatacatggtcaatttgg 604
Query: 498 tgaagatggccggattcaggaattgctagaaaagtataatgttccatatgttggcacagg 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgaagatggccggattcaggaattgctagaaaagtataatgttccatatgttggcacagg 664
Query: 558 atcgaaagagtgctgccaagcatttgacaagtataaagcatcattggagctcaggcagca 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 665 atcgaaagagtgctgccaagcatttgacaagtataaagcatcattggagctcaggaagca 724
Query: 618 tggcttcgtaacagtgcccagtttcttggttcaggggcataaaacagacaaatcagaact 677
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 725 tggcttcgtaacagtgcccagtttcttggttcaggggcataaaacagacgaatcagaact 784
Query: 678 atcagagtggt 688
|||||||||||
Sbjct: 785 atcagagtggt 795
Score = 504 bits (254), Expect = e-141
Identities = 257/258 (99%)
Strand = Plus / Plus
Query: 1 atggccacgtcatcaattgccggcatttcctccatctccgtccttctccgccgcagcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggccacgtcatcaattgccggcatttcctccatctccgtccttctccgccgcagcgac 122
Query: 61 gccgtgcacggtggcgctactgctgctactcgcgctctgtcatcagcccccatcttcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gccgtgcacggtggcgctactgctgctactcgcgctctgtcatcagcccccatcttcctc 182
Query: 121 agacgcttcggactgaagcacgagctgcgcacgtgccgtgccactccttccattgcacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agacgcttcggactgaagcacgagctgcgcacgtgccgtgccactccttccattgcacgt 242
Query: 181 gcttccgcacgtgaggtggtggtcgttgacggtggcgttgagaaaacgaaggaggaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 243 gcttccgcacgtgaggtggtggtcgttgacggtggcgttgagaaaacgaaggaagaaggg 302
Query: 241 agggtgctgaaggttggt 258
||||||||||||||||||
Sbjct: 303 agggtgctgaaggttggt 320
>gnl|LJGI|BP052728 similar to UniRef100_A7QFI6 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 452
Score = 458 bits (231), Expect = e-128
Identities = 308/334 (92%)
Strand = Plus / Minus
Query: 2496 tggcgatattttgtcattggaggagaaattccaaggtgggactggcatcaatctgactcc 2555
|||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 452 tggcgatattttntcattggaggagaaattcccaggtgggactggcatccatctgactcc 393
Query: 2556 acctccgttgtcgatcatgagtgagaaagctttgcagagatgtaaaaagcatattgaaca 2615
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 392 ccctccgttgtcgatcatgagtgagaaagctttgccgagatgtaaaaagcatattgtccc 333
Query: 2616 gattgcaaacaccctacaattagaaggattttcacgtattgatgcatttgtcaatgttga 2675
|||| | | | |||||| ||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 332 gattcccacccccctaccattagaaggattttcacgtattgatgcctttgtccatgttga 273
Query: 2676 caacggagaggttttgattatagagataaatactgtgcccggaatgacaccttccactgt 2735
| ||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 272 ccacggagaggttttgattatagaggtaaatactgtgcccggaatgaccccttcccctgt 213
Query: 2736 tctgattcatcaggcactggcggaacaaccaccattgtatcctcatcagttcttccgtac 2795
||||||||||| ||| ||||||| || ||| || ||||||||||||| ||||||||||||
Sbjct: 212 tctgattcatccggccctggcgggaccaccccccttgtatcctcatccgttcttccgtac 153
Query: 2796 gcttcttgatttgggatctgtaaggtctatgtaa 2829
||||||||||||||||||||||||||||||||||
Sbjct: 152 gcttcttgatttgggatctgtaaggtctatgtaa 119