Miyakogusa Predicted Gene
- Lj1g3v2416620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2416620.1 tr|B6SSR9|B6SSR9_MAIZE WRKY53-superfamily of TFs
having WRKY and zinc finger domains OS=Zea mays
PE=,42.62,0.00000000000007,WRKY,DNA-binding WRKY; WRKY DNA-binding
domain,DNA-binding WRKY; SUBFAMILY NOT NAMED,NULL; FAMILY
NO,CUFF.29003.1
(798 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64786 similar to UniRef100_A7LHF5 Cluster: WRKY5; n=1... 1302 0.0
gnl|LJGI|DC593983 similar to UniRef100_O81639 Cluster: Zinc fing... 240 1e-62
gnl|LJGI|TC79677 similar to UniRef100_A7LHF5 Cluster: WRKY5; n=1... 174 5e-43
gnl|LJGI|TC58889 similar to UniRef100_Q3LHK9 Cluster: Double WRK... 174 5e-43
gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; ... 145 5e-34
gnl|LJGI|TC61070 similar to UniRef100_Q40090 Cluster: SPF1 prote... 117 1e-25
gnl|LJGI|TC71912 similar to UniRef100_A7QQF6 Cluster: Chromosome... 62 6e-09
gnl|LJGI|DC594491 homologue to UniRef100_Q2PJS1 Cluster: WRKY53;... 56 3e-07
gnl|LJGI|TC69789 homologue to UniRef100_Q2PJS1 Cluster: WRKY53; ... 56 3e-07
>gnl|LJGI|TC64786 similar to UniRef100_A7LHF5 Cluster: WRKY5; n=1; Glycine max|Rep:
WRKY5 - Glycine max (Soybean), partial (66%)
Length = 911
Score = 1302 bits (657), Expect = 0.0
Identities = 667/669 (99%), Gaps = 1/669 (0%)
Strand = Plus / Plus
Query: 130 tcatgcaccaactcagttatttctgatatacaagaagattcttcagcatctgtaggagag 189
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatgcaccaactcagttatt-ctgatatacaagaagattcttcagcatctgtaggagag 59
Query: 190 gaagactttgcggcgcaaacatcacaaactagttattctggaggaaatgatgatgatttt 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaagactttgcggcgcaaacatcacaaactagttattctggaggaaatgatgatgatttt 119
Query: 250 ggaccagaggccaaaagatggaagggagataatgaaaatgatagctattctgcctcagag 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ggaccagaggccaaaagatggaagggagataatgaaaatgatagctattctgcctcagag 179
Query: 310 agtagaactgttaaggaacctagagttgttgttcaaactagaagtgaaattgatatactt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agtagaactgttaaggaacctagagttgttgttcaaactagaagtgaaattgatatactt 239
Query: 370 gatgatggctataggtggaggaaatatgggcagaaagtagttaagggaaacccaaatgca 429
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 240 gatgatggctataggtggaggaaatatggacagaaagtagttaagggaaacccaaatgca 299
Query: 430 aggagctattacaaatgcacagcccaaggttgttcagtgagaaaacacgttgagagagcc 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aggagctattacaaatgcacagcccaaggttgttcagtgagaaaacacgttgagagagcc 359
Query: 490 gcacatgatatcaaatctgttatcacaacttatgaagggaagcacaaccatgatgtacct 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gcacatgatatcaaatctgttatcacaacttatgaagggaagcacaaccatgatgtacct 419
Query: 550 gctgcacgcggtagtgcaggttataacatgaacagaaattctctgaacagcaccgtatca 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gctgcacgcggtagtgcaggttataacatgaacagaaattctctgaacagcaccgtatca 479
Query: 610 gcacctataaagccctcagtggtgagctgttataataatagtgcatctagcttcacaaat 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gcacctataaagccctcagtggtgagctgttataataatagtgcatctagcttcacaaat 539
Query: 670 tcagtttataagactaagcttccagaaaatggaaatcaagaatcatatccacagaacata 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcagtttataagactaagcttccagaaaatggaaatcaagaatcatatccacagaacata 599
Query: 730 ttgcagagtcctggaagctttgggagggatagctcattccttcagtcatttctatcaaag 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttgcagagtcctggaagctttgggagggatagctcattccttcagtcatttctatcaaag 659
Query: 790 ggtttctaa 798
|||||||||
Sbjct: 660 ggtttctaa 668
>gnl|LJGI|DC593983 similar to UniRef100_O81639 Cluster: Zinc finger protein; n=1;
Pimpinella brachycarpa|Rep: Zinc finger protein -
Pimpinella brachycarpa, partial (26%)
Length = 587
Score = 240 bits (121), Expect = 1e-62
Identities = 216/248 (87%), Gaps = 6/248 (2%)
Strand = Plus / Plus
Query: 205 caaacatcacaaactagttattctggaggaaatgatgatgattttggaccagaggccaaa 264
|||||||||||| |||||||||||| || ||||||||||| |||||||||| ||||||
Sbjct: 332 caaacatcacaacttagttattctggtgggaatgatgatgaccttggaccagatgccaaa 391
Query: 265 agatggaagggagataatgaaaatgatagctattct------gcctcagagagtagaact 318
|||||||||||||| ||||||||||| ||||||| ||| | | || ||||||
Sbjct: 392 agatggaagggagaggatgaaaatgatggctattcctattccgcccctggaagcagaact 451
Query: 319 gttaaggaacctagagttgttgttcaaactagaagtgaaattgatatacttgatgatggc 378
||||||||||| |||||||| |||||||||| |||||| ||||| |||||||||||||||
Sbjct: 452 gttaaggaaccaagagttgtggttcaaactacaagtgagattgacatacttgatgatggc 511
Query: 379 tataggtggaggaaatatgggcagaaagtagttaagggaaacccaaatgcaaggagctat 438
||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 512 tataggtggagaaaatatgggcagaaagttgttaagggaaacccaaacccaaggagctac 571
Query: 439 tacaaatg 446
||||||||
Sbjct: 572 tacaaatg 579
Score = 63.9 bits (32), Expect = 1e-09
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 1 atgaggaagaaagttgagaggtctttggatggagaaattactgaaatagtctataaggga 60
|||| |||||||||||||| |||| |||| ||| | || ||||||||||| || ||||||
Sbjct: 149 atgaagaagaaagttgagaagtctgtggagggacacatcactgaaatagtatacaaggga 208
Query: 61 agtcataaccaccccaagccccagtctacgagaagaacaagctctcaa 108
| ||| ||||| || || || || ||||| | ||||||||| ||||||
Sbjct: 209 actcacaaccatcctaaaccacaatctaccaaaagaacaagttctcaa 256
>gnl|LJGI|TC79677 similar to UniRef100_A7LHF5 Cluster: WRKY5; n=1; Glycine max|Rep:
WRKY5 - Glycine max (Soybean), partial (42%)
Length = 819
Score = 174 bits (88), Expect = 5e-43
Identities = 181/212 (85%)
Strand = Plus / Plus
Query: 334 gttgttgttcaaactagaagtgaaattgatatacttgatgatggctataggtggaggaaa 393
||||| |||||||||| |||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 2 gttgtggttcaaactacaagtgagattgacatacttgatgatggctataggtggagaaaa 61
Query: 394 tatgggcagaaagtagttaagggaaacccaaatgcaaggagctattacaaatgcacagcc 453
|||||||||||||| ||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 62 tatgggcagaaagttgttaagggaaacccaaacccaaggagctactacaaatgtgtgacc 121
Query: 454 caaggttgttcagtgagaaaacacgttgagagagccgcacatgatatcaaatctgttatc 513
| |||||| ||||||||||||| | ||| |||| || |||| || ||| |||| |||
Sbjct: 122 ccgggttgtgcagtgagaaaacatatagagcgagctgcgaatgacatgaaagctgtgatc 181
Query: 514 acaacttatgaagggaagcacaaccatgatgt 545
|| ||||||||||| || ||||||||||||||
Sbjct: 182 accacttatgaaggaaaacacaaccatgatgt 213
>gnl|LJGI|TC58889 similar to UniRef100_Q3LHK9 Cluster: Double WRKY type transfactor;
n=1; Solanum tuberosum|Rep: Double WRKY type transfactor
- Solanum tuberosum (Potato), partial (15%)
Length = 762
Score = 174 bits (88), Expect = 5e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 atgaggaagaaagttgagaggtctttggatggagaaattactgaaatagtctataaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atgaggaagaaagttgagaggtctttggatggagaaattactgaaatagtctataaggga 734
Query: 61 agtcataaccaccccaagccccagtcta 88
||||||||||||||||||||||||||||
Sbjct: 735 agtcataaccaccccaagccccagtcta 762
>gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; n=1; Glycine
max|Rep: WRKY39 - Glycine max (Soybean), partial (62%)
Length = 1146
Score = 145 bits (73), Expect = 5e-34
Identities = 199/241 (82%)
Strand = Plus / Plus
Query: 325 gaacctagagttgttgttcaaactagaagtgaaattgatatacttgatgatggctatagg 384
||||| |||||||| ||||| || | ||||| |||||||| || |||||||| || ||
Sbjct: 230 gaacccagagttgtggttcagaccaccagtgacattgatatcctagatgatggttacaga 289
Query: 385 tggaggaaatatgggcagaaagtagttaagggaaacccaaatgcaaggagctattacaaa 444
||||||||||||||||||||||| || |||||||| |||||| ||||||| || || |||
Sbjct: 290 tggaggaaatatgggcagaaagttgtaaagggaaatccaaatccaaggagttactataaa 349
Query: 445 tgcacagcccaaggttgttcagtgagaaaacacgttgagagagccgcacatgatatcaaa 504
|||||| || ||| ||| ||||||| || || || |||||||| |||||||| | | |
Sbjct: 350 tgcacacacccaggatgtccagtgaggaagcatgtggagagagcttcacatgatctaaga 409
Query: 505 tctgttatcacaacttatgaagggaagcacaaccatgatgtacctgctgcacgcggtagt 564
|||| |||||||| |||||||| || |||||||||||||| ||||| || ||||| |||
Sbjct: 410 gctgtgatcacaacatatgaaggaaaacacaaccatgatgtccctgcggctcgcggaagt 469
Query: 565 g 565
|
Sbjct: 470 g 470
>gnl|LJGI|TC61070 similar to UniRef100_Q40090 Cluster: SPF1 protein; n=1; Ipomoea
batatas|Rep: SPF1 protein - Ipomoea batatas (Sweet
potato) (Batate), partial (41%)
Length = 1517
Score = 117 bits (59), Expect = 1e-25
Identities = 174/211 (82%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 331 agagttgttgttcaaactagaagtgaaattgatatacttgatgatggctataggtggagg 390
|||||||| |||||||| | ||||| |||||||| ||||||||||| || | ||||||
Sbjct: 1206 agagttgtggttcaaacaaccagtgacattgatattcttgatgatggataccgatggagg 1265
Query: 391 aaatatgggcagaaagtagttaagggaaacccaaatgcaaggagctattacaaatgcaca 450
|||||||||||||||||||| |||||||| |||||| ||||||| || ||||| ||||||
Sbjct: 1266 aaatatgggcagaaagtagtaaagggaaatccaaatccaaggagttactacaagtgcaca 1325
Query: 451 gcccaaggttgttcagtgagaaaacacgttgagagagccgcacatgatatcaaatctgtt 510
|| || || ||||||| || ||||| ||| ||||| |||| ||| | ||| | ||
Sbjct: 1326 atccctggatgcccagtgaggaagcacgtggagcgagcctcacaggatctaaaagcagtg 1385
Query: 511 atcacaacttatgaagggaagcacaaccatg 541
|||||||| |||| ||| |||||||||||||
Sbjct: 1386 atcacaacctatg-aggaaagcacaaccatg 1415
>gnl|LJGI|TC71912 similar to UniRef100_A7QQF6 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 991
Score = 61.9 bits (31), Expect = 6e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 481 gagagagccgcacatgatatcaaatctgttatcacaacttatgaagggaagcacaaccat 540
|||||||| ||||||| | |||||||| ||||| || ||||| || ||||||||||||
Sbjct: 318 gagagagcatcacatgaccttaaatctgtgatcacgacctatgagggaaagcacaaccat 377
Query: 541 gatgtacctgctgcacgcg 559
||||| |||||||| ||||
Sbjct: 378 gatgtccctgctgctcgcg 396
>gnl|LJGI|DC594491 homologue to UniRef100_Q2PJS1 Cluster: WRKY53; n=1; Glycine
max|Rep: WRKY53 - Glycine max (Soybean), partial (24%)
Length = 575
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 359 ttgatatacttgatgatggctataggtggaggaaatatgg 398
||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 375 ttgatattcttgatgatggctatcgatggaggaaatatgg 414
>gnl|LJGI|TC69789 homologue to UniRef100_Q2PJS1 Cluster: WRKY53; n=1; Glycine
max|Rep: WRKY53 - Glycine max (Soybean), partial (55%)
Length = 978
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 359 ttgatatacttgatgatggctataggtggaggaaatatgg 398
||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 447 ttgatattcttgatgatggctatcgatggaggaaatatgg 486