Miyakogusa Predicted Gene
- Lj1g3v2391190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2391190.1 tr|G7KU41|G7KU41_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_7g0,78.12,0,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
N,CUFF.28979.1
(1924 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59264 weakly similar to UniRef100_A7P6A4 Cluster: Chr... 1411 0.0
gnl|LJGI|TC63142 similar to UniRef100_A7P6A4 Cluster: Chromosome... 295 5e-79
>gnl|LJGI|TC59264 weakly similar to UniRef100_A7P6A4 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 753
Score = 1411 bits (712), Expect = 0.0
Identities = 712/712 (100%)
Strand = Plus / Plus
Query: 1 atgcaaggactcaccttcctcatttccctcaaacccaaacctttcattccattctccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atgcaaggactcaccttcctcatttccctcaaacccaaacctttcattccattctccctt 101
Query: 61 cgattctcaaccaccatcgccaccccttcatctccatcacttcaacacagcatcgccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 cgattctcaaccaccatcgccaccccttcatctccatcacttcaacacagcatcgccacc 161
Query: 121 acactccacgctctctgcgactccaaccgtttctccgaagcgcaccaatgcttctccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 acactccacgctctctgcgactccaaccgtttctccgaagcgcaccaatgcttctccatt 221
Query: 181 tccctcgcctccggttccgtccccgaccaccgaacctgcaacgtcctcctcgctcgcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tccctcgcctccggttccgtccccgaccaccgaacctgcaacgtcctcctcgctcgcttg 281
Query: 241 ctacgttcccgaaccccacttcaaacctgggcactcgtccgatccttgatcgtagccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ctacgttcccgaaccccacttcaaacctgggcactcgtccgatccttgatcgtagccaaa 341
Query: 301 cccggttttgttccttctttggtcaattaccatcgtttgatggaccagttttgcgtgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cccggttttgttccttctttggtcaattaccatcgtttgatggaccagttttgcgtgttt 401
Query: 361 cgtcgaccatgtgatgctcacaggatcttttttgacatgaagaatcgtgggcattgcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cgtcgaccatgtgatgctcacaggatcttttttgacatgaagaatcgtgggcattgcccc 461
Query: 421 aatgttgtttcttacactactttgattaatgggtattgctctgttggtgggattggagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aatgttgtttcttacactactttgattaatgggtattgctctgttggtgggattggagat 521
Query: 481 gcacgtaaggtgtttgatgaaatgcttgagagtggtgtggaaccgaattcgttgacttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gcacgtaaggtgtttgatgaaatgcttgagagtggtgtggaaccgaattcgttgacttac 581
Query: 541 agtgttttaattcgtggggttcttcaggagagggatttggaaggtgggagggagctgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agtgttttaattcgtggggttcttcaggagagggatttggaaggtgggagggagctgatg 641
Query: 601 tgcaagttatgggagaggatgagtgtggaagttgaatcgggagtgaaggttgcggctttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgcaagttatgggagaggatgagtgtggaagttgaatcgggagtgaaggttgcggctttt 701
Query: 661 gcaaatttggttgattctttgtgtagggaagggtttttcaatgaagtgttta 712
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gcaaatttggttgattctttgtgtagggaagggtttttcaatgaagtgttta 753
>gnl|LJGI|TC63142 similar to UniRef100_A7P6A4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 788
Score = 295 bits (149), Expect = 5e-79
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 1776 tagagagatgaaaaagaatggactgaaccctgattgtgtgacatggaggattcttcacaa 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagagagatgaaaaagaatggactgaaccctgattgtgtgacatggaggattcttcacaa 60
Query: 1836 gatacaaggaaaagtgaggaagcaaactctttctgaatatcaaagcttgtcaataaatta 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatacaaggaaaagtgaggaagcaaactctttctgaatatcaaagcttgtcaataaatta 120
Query: 1896 tgaaggtcaggacatggacaataaataag 1924
|||||||||||||||||||||||||||||
Sbjct: 121 tgaaggtcaggacatggacaataaataag 149