Miyakogusa Predicted Gene
- Lj1g3v2379130.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2379130.3 tr|G7KTA8|G7KTA8_MEDTR Integrator complex subunit
OS=Medicago truncatula GN=MTR_7g070280 PE=4 SV=1,69.33,0,no
description,Armadillo-like helical; seg,NULL; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; ARM,CUFF.28984.3
(2694 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68552 weakly similar to UniRef100_A7QFG0 Cluster: Chr... 950 0.0
gnl|LJGI|TC71456 weakly similar to UniRef100_A7QFG0 Cluster: Chr... 850 0.0
>gnl|LJGI|TC68552 weakly similar to UniRef100_A7QFG0 Cluster: Chromosome chr8
scaffold_88, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 792
Score = 950 bits (479), Expect = 0.0
Identities = 482/483 (99%)
Strand = Plus / Plus
Query: 205 gccaccctaaacccttcattcaccctcgacacactcctcccctccgcggctgagtccacc 264
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gccaccctacacccttcattcaccctcgacacactcctcccctccgcggctgagtccacc 349
Query: 265 actcgcctcgccgttgaggccctcgccgctttgaagccgggttgcgaactcgacggcgaa 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 actcgcctcgccgttgaggccctcgccgctttgaagccgggttgcgaactcgacggcgaa 409
Query: 325 acctttgtctcgctctgtttcgggccctccgtgccggcgcggctgtggatgctgaggaat 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 acctttgtctcgctctgtttcgggccctccgtgccggcgcggctgtggatgctgaggaat 469
Query: 385 gcgggtttggggtatcgggttcgacccgcattgctgtttccggtgctgttggggttcacg 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gcgggtttggggtatcgggttcgacccgcattgctgtttccggtgctgttggggttcacg 529
Query: 445 agagaccctttcccttatgtgagggaggcttcgttggaagggctcgttcggttgagcgag 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 agagaccctttcccttatgtgagggaggcttcgttggaagggctcgttcggttgagcgag 589
Query: 505 tgtggagagttccaagaccttggcttggtgaaagggtgttatcaacgtgccgttcagctt 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgtggagagttccaagaccttggcttggtgaaagggtgttatcaacgtgccgttcagctt 649
Query: 565 ctcggtgatgtggaaggttgcgttaggatatctgcgcttcgtgttgtagcttcatggggt 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctcggtgatgtggaaggttgcgttaggatatctgcgcttcgtgttgtagcttcatggggt 709
Query: 625 ttgatgttagcagcttttaatgcagacatgaaggtgtattggtccaatgaagtatttgcc 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ttgatgttagcagcttttaatgcagacatgaaggtgtattggtccaatgaagtatttgcc 769
Query: 685 aag 687
|||
Sbjct: 770 aag 772
Score = 121 bits (61), Expect = 2e-26
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 atggacgacacttccgaacccgaaccagaaaccgcacctaaccaaacccaacaacaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atggacgacacttccgaacccgaaccagaaaccgcacctaaccaaacccaacaacaacaa 145
Query: 61 c 61
|
Sbjct: 146 c 146
Score = 60.0 bits (30), Expect = 8e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 103 atcaacccttcaaccccaaaacgcaccgtt 132
||||||||||||||||||||||||||||||
Sbjct: 188 atcaacccttcaaccccaaaacgcaccgtt 217
>gnl|LJGI|TC71456 weakly similar to UniRef100_A7QFG0 Cluster: Chromosome chr8
scaffold_88, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_88, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 640
Score = 850 bits (429), Expect = 0.0
Identities = 442/445 (99%), Gaps = 1/445 (0%)
Strand = Plus / Plus
Query: 2251 gaacttggcaagttatt-acatgagtgcacctccacatatgaagcttcctgcagtccact 2309
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacttggcaagttatttacatgagtgcacctccacatatgaagcttcctgcagtccact 60
Query: 2310 tgaacttgataaatgtctcaagttattctccctgaagcagtttatgtttcatggaggaat 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacttgataaatgtctcaagttattctccctgaagcagtttatgtttcatggaggaat 120
Query: 2370 cagacatgtaaaggcagaactaagcattcccaataatgactctgaacatcatcttacctt 2429
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 121 cagacatgtaaaggcagaactaagcattccccataatgactctgaacatcatcttacctt 180
Query: 2430 tgtttcaggactaccagttggtatacaatgtgagataactctccataatgttttatgtga 2489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtttcaggactaccagttggtatacaatgtgagataactctccataatgttttatgtga 240
Query: 2490 tagtaggttgtggctgaggatgagtgtggatgatggttcaacacaatatgtctttcttga 2549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagtaggttgtggctgaggatgagtgtggatgatggttcaacacaatatgtctttcttga 300
Query: 2550 tttggaccgttttgaaggctccagagaggtaaggaagttagctttcgttgtgccgtttta 2609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttggaccgttttgaaggctccagagaggtaaggaagttagctttcgttgtgccgtttta 360
Query: 2610 cagaacaccaaaagctaattctcttaaattgaaggtttctattggtttggaatgtatgtt 2669
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagaacacccaaagctaattctcttaaattgaaggtttctattggtttggaatgtatgtt 420
Query: 2670 tgaaaatgtttgtccagtccagagg 2694
|||||||||||||||||||||||||
Sbjct: 421 tgaaaatgtttgtccagtccagagg 445