Miyakogusa Predicted Gene
- Lj1g3v2378100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2378100.1 Non Chatacterized Hit- tr|I1LQY0|I1LQY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45205
PE,82.13,0,seg,NULL; NOC3p,Nucleolar complex-associated;
CBF,CCAAT-binding factor; coiled-coil,NULL; ARM repeat,CUFF.28976.1
(2496 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70139 similar to UniRef100_A7QD66 Cluster: Chromosome... 1047 0.0
gnl|LJGI|BP064929 weakly similar to UniRef100_A7QD66 Cluster: Ch... 615 e-175
gnl|LJGI|BP065923 weakly similar to UniRef100_A7QD66 Cluster: Ch... 170 3e-41
>gnl|LJGI|TC70139 similar to UniRef100_A7QD66 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (17%)
Length = 608
Score = 1047 bits (528), Expect = 0.0
Identities = 575/596 (96%), Gaps = 21/596 (3%)
Strand = Plus / Plus
Query: 1 atggggaagaagccgaagcaaaagatcattcttccgccggaactcccgccggagattcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 atggggaagaagccgaagcaaaagatcattcttccgccggaactcccgccggagattcca 72
Query: 61 gacgacgaagttgagatttccgatgatgacctccaattcgtcaaggacaaccgcgccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gacgacgaagttgagatttccgatgatgacctccaattcgtcaaggacaaccgcgccttt 132
Query: 121 gcctccttgctttccaccttggacacccaatcaatcaccaggcatgttacacgggttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcctccttgctttccaccttggacacccaatcaatcaccaggcatgttacacgggttgct 192
Query: 181 gatgctaaagatgatgcgttggagaaactttatgagcagcgcatgcaaaagactgctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gatgctaaagatgatgcgttggagaaactttatgagcagcgcatgcaaaagactgctctc 252
Query: 241 aagaaagagaaagaggaaacaggtt---------------------ctcttccaatcaag 279
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 253 aagaaagagaaagaggaaacaggtttgcaggttgatcgtgtagacgctcttccaatcaag 312
Query: 280 accttggatgggaaactctattaccgaacagctacaaatagggtatcagaaaatggtcca 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 accttggatgggaaactctattaccgaacagctacaaatagggtatcagaaaatggtcca 372
Query: 340 aatgaagaggaagctggagaggatgaaaatgttgacaaaggtctagtgaagctaactaag 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aatgaagaggaagctggagaggatgaaaatgttgacaaaggtctagtgaagctaactaag 432
Query: 400 gctgaaaagagagccaagcttaagaaaatgaggaaagaggagaaaaaacatgggaaggag 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gctgaaaagagagccaagcttaagaaaatgaggaaagaggagaaaaaacatgggaaggag 492
Query: 460 gtgcctaaagcagaagtggaagaaacaccacaagcagcagtactggctgaggttaaagaa 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtgcctaaagcagaagtggaagaaacaccacaagcagcagtactggctgaggttaaagaa 552
Query: 520 gatcttgaagctgaggagacatttgaaactaaaaagtgtaaacttgcagaattggg 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gatcttgaagctgaggagacatttgaaactaaaaagtgtaaacttgcagaattggg 608
>gnl|LJGI|BP064929 weakly similar to UniRef100_A7QD66 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(6%)
Length = 506
Score = 615 bits (310), Expect = e-175
Identities = 316/318 (99%)
Strand = Plus / Minus
Query: 2179 gctcttacggaaatgtctctggaccaggaattgtgtttcacacaaattagcagtataaaa 2238
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 506 gctcttacggaaatgtctctggaccaggaattgtgtttcacacgaattagcagtataaaa 447
Query: 2239 ttaaataacaaaaagcgacggacaaatggccctgccgcatcaacttccactggttcaaca 2298
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttaaataaccaaaagcgacggacaaatggccctgccgcatcaacttccactggttcaaca 387
Query: 2299 acagcaacgactccactgaatgatgatgagttgcgaaagaaacttagttcccatttcatg 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acagcaacgactccactgaatgatgatgagttgcgaaagaaacttagttcccatttcatg 327
Query: 2359 gttcttcatgatatcaaggagaatgaaaagttgaggagtaagttggataggacaacgcga 2418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gttcttcatgatatcaaggagaatgaaaagttgaggagtaagttggataggacaacgcga 267
Query: 2419 tcactgcagctatatgagcagtataagaaacaaaagaagcaacgatcaaaaccaactaga 2478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcactgcagctatatgagcagtataagaaacaaaagaagcaacgatcaaaaccaactaga 207
Query: 2479 ttatcagccattgcttag 2496
||||||||||||||||||
Sbjct: 206 ttatcagccattgcttag 189
>gnl|LJGI|BP065923 weakly similar to UniRef100_A7QD66 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 363
Score = 170 bits (86), Expect = 3e-41
Identities = 149/170 (87%)
Strand = Plus / Minus
Query: 2327 agttgcgaaagaaacttagttcccatttcatggttcttcatgatatcaaggagaatgaaa 2386
|||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||
Sbjct: 363 agttgcgaaagaaacttagttcccccttcctggtttttcatgatatccaggagaatgaaa 304
Query: 2387 agttgaggagtaagttggataggacaacgcgatcactgcagctatatgagcagtataaga 2446
| ||||||||||| ||||||||||| |||||||| |||| |||||||| || ||||||||
Sbjct: 303 aattgaggagtaaattggataggaccacgcgatccctgccgctatatgggccgtataaga 244
Query: 2447 aacaaaagaagcaacgatcaaaaccaactagattatcagccattgcttag 2496
||| ||| ||| |||||| |||| ||||||||||| ||| ||||||||
Sbjct: 243 aacccaaggagccacgatcctaacccactagattatccgcccttgcttag 194