Miyakogusa Predicted Gene
- Lj1g3v2374700.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2374700.2 tr|Q0DU33|Q0DU33_ORYSJ Os03g0210500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g02105,48.48,0.00000000000001,At5g01610-like,Protein of unknown
function DUF538; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
,CUFF.28953.2
(489 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63596 similar to UniRef100_Q70VA9 Cluster: Cp protein... 948 0.0
gnl|LJGI|TC59046 similar to UniRef100_Q70VA9 Cluster: Cp protein... 317 4e-86
>gnl|LJGI|TC63596 similar to UniRef100_Q70VA9 Cluster: Cp protein; n=1; Celosia
cristata|Rep: Cp protein - Celosia cristata, complete
Length = 716
Score = 948 bits (478), Expect = 0.0
Identities = 478/478 (100%)
Strand = Plus / Plus
Query: 12 gttcagcaagaaggccaacaaggagcttaactctgtcggtgatgatatcaactcactttc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gttcagcaagaaggccaacaaggagcttaactctgtcggtgatgatatcaactcactttc 136
Query: 72 aacaagtattgaaggaggaactaaatggttggtcaacaaattaaaaggaaagatgcaaaa 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aacaagtattgaaggaggaactaaatggttggtcaacaaattaaaaggaaagatgcaaaa 196
Query: 132 gccattaatagagttgctaaaggagcatgatctaccgataggcatttttcctcgtgacgc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gccattaatagagttgctaaaggagcatgatctaccgataggcatttttcctcgtgacgc 256
Query: 192 aaccaactatgaatttaacgaacaaacagggaagcttgttgtatacattcctcaagtgtg 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaccaactatgaatttaacgaacaaacagggaagcttgttgtatacattcctcaagtgtg 316
Query: 252 tgaagtaggatacagggactcatcagtcttgcgtttctccaccagtgtgtctggttattt 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgaagtaggatacagggactcatcagtcttgcgtttctccaccagtgtgtctggttattt 376
Query: 312 agagaaaggcaagttaacagacattgagggaatgaaaaccaaagtgctgatctgggcaaa 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agagaaaggcaagttaacagacattgagggaatgaaaaccaaagtgctgatctgggcaaa 436
Query: 372 agtgaccaccattacatctgagggatccaagctccatttctcggctggaatgaagaaaac 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agtgaccaccattacatctgagggatccaagctccatttctcggctggaatgaagaaaac 496
Query: 432 gaggagaaaggaggcatatgaggtttctagagatggtgtaagcgtagataaattctaa 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaggagaaaggaggcatatgaggtttctagagatggtgtaagcgtagataaattctaa 554
>gnl|LJGI|TC59046 similar to UniRef100_Q70VA9 Cluster: Cp protein; n=1; Celosia
cristata|Rep: Cp protein - Celosia cristata, complete
Length = 797
Score = 317 bits (160), Expect = 4e-86
Identities = 337/396 (85%)
Strand = Plus / Plus
Query: 94 aaatggttggtcaacaaattaaaaggaaagatgcaaaagccattaatagagttgctaaag 153
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 218 aaatggttggtcaacaaattaaaaggaaagatgcaaaagccattaacggagctgctaaag 277
Query: 154 gagcatgatctaccgataggcatttttcctcgtgacgcaaccaactatgaatttaacgaa 213
||| |||||||||| || || || ||||||||||||||||| ||||||||||||||| |
Sbjct: 278 gagtatgatctaccaatcggaatctttcctcgtgacgcaacaaactatgaatttaaccca 337
Query: 214 caaacagggaagcttgttgtatacattcctcaagtgtgtgaagtaggatacagggactca 273
| ||||| ||||||||||| |||||||||||||| ||||||||||| |||| ||| |||
Sbjct: 338 gagacaggaaagcttgttgtttacattcctcaagtctgtgaagtaggctacaaggattca 397
Query: 274 tcagtcttgcgtttctccaccagtgtgtctggttatttagagaaaggcaagttaacagac 333
||||| || || |||| ||||| ||| |||||||| | |||||||| ||| || |||||
Sbjct: 398 tcagttttacgcttcttcaccaccgtgactggttatctggagaaaggaaagctagcagac 457
Query: 334 attgagggaatgaaaaccaaagtgctgatctgggcaaaagtgaccaccattacatctgag 393
|| ||||||||||| || |||||| ||||||||| ||||||||| |||||| | || |||
Sbjct: 458 atagagggaatgaagacaaaagtgttgatctgggtaaaagtgacaaccatttcctcggag 517
Query: 394 ggatccaagctccatttctcggctggaatgaagaaaacgaggagaaaggaggcatatgag 453
||||| |||||| || | | ||||| ||||||||||| ||||| | ||| ||||||||
Sbjct: 518 ggatcgaagctctatgtgactgctggcatgaagaaaacaaggagtagggaagcatatgaa 577
Query: 454 gtttctagagatggtgtaagcgtagataaattctaa 489
||| | ||||||||| || | ||||||| ||||||
Sbjct: 578 gttacaagagatggtatatgtatagataagttctaa 613