Miyakogusa Predicted Gene

Lj1g3v2374700.2
Show Alignment: 
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2374700.2 tr|Q0DU33|Q0DU33_ORYSJ Os03g0210500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g02105,48.48,0.00000000000001,At5g01610-like,Protein of unknown
function DUF538; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
,CUFF.28953.2
         (489 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63596 similar to UniRef100_Q70VA9 Cluster: Cp protein...   948   0.0  
gnl|LJGI|TC59046 similar to UniRef100_Q70VA9 Cluster: Cp protein...   317   4e-86

>gnl|LJGI|TC63596 similar to UniRef100_Q70VA9 Cluster: Cp protein; n=1; Celosia
           cristata|Rep: Cp protein - Celosia cristata, complete
          Length = 716

 Score =  948 bits (478), Expect = 0.0
 Identities = 478/478 (100%)
 Strand = Plus / Plus

                                                                       
Query: 12  gttcagcaagaaggccaacaaggagcttaactctgtcggtgatgatatcaactcactttc 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  gttcagcaagaaggccaacaaggagcttaactctgtcggtgatgatatcaactcactttc 136

                                                                       
Query: 72  aacaagtattgaaggaggaactaaatggttggtcaacaaattaaaaggaaagatgcaaaa 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aacaagtattgaaggaggaactaaatggttggtcaacaaattaaaaggaaagatgcaaaa 196

                                                                       
Query: 132 gccattaatagagttgctaaaggagcatgatctaccgataggcatttttcctcgtgacgc 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gccattaatagagttgctaaaggagcatgatctaccgataggcatttttcctcgtgacgc 256

                                                                       
Query: 192 aaccaactatgaatttaacgaacaaacagggaagcttgttgtatacattcctcaagtgtg 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaccaactatgaatttaacgaacaaacagggaagcttgttgtatacattcctcaagtgtg 316

                                                                       
Query: 252 tgaagtaggatacagggactcatcagtcttgcgtttctccaccagtgtgtctggttattt 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgaagtaggatacagggactcatcagtcttgcgtttctccaccagtgtgtctggttattt 376

                                                                       
Query: 312 agagaaaggcaagttaacagacattgagggaatgaaaaccaaagtgctgatctgggcaaa 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agagaaaggcaagttaacagacattgagggaatgaaaaccaaagtgctgatctgggcaaa 436

                                                                       
Query: 372 agtgaccaccattacatctgagggatccaagctccatttctcggctggaatgaagaaaac 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agtgaccaccattacatctgagggatccaagctccatttctcggctggaatgaagaaaac 496

                                                                     
Query: 432 gaggagaaaggaggcatatgaggtttctagagatggtgtaagcgtagataaattctaa 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaggagaaaggaggcatatgaggtttctagagatggtgtaagcgtagataaattctaa 554


>gnl|LJGI|TC59046 similar to UniRef100_Q70VA9 Cluster: Cp protein; n=1; Celosia
           cristata|Rep: Cp protein - Celosia cristata, complete
          Length = 797

 Score =  317 bits (160), Expect = 4e-86
 Identities = 337/396 (85%)
 Strand = Plus / Plus

                                                                       
Query: 94  aaatggttggtcaacaaattaaaaggaaagatgcaaaagccattaatagagttgctaaag 153
           ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||
Sbjct: 218 aaatggttggtcaacaaattaaaaggaaagatgcaaaagccattaacggagctgctaaag 277

                                                                       
Query: 154 gagcatgatctaccgataggcatttttcctcgtgacgcaaccaactatgaatttaacgaa 213
           ||| |||||||||| || || || ||||||||||||||||| |||||||||||||||  |
Sbjct: 278 gagtatgatctaccaatcggaatctttcctcgtgacgcaacaaactatgaatttaaccca 337

                                                                       
Query: 214 caaacagggaagcttgttgtatacattcctcaagtgtgtgaagtaggatacagggactca 273
            | ||||| ||||||||||| |||||||||||||| ||||||||||| |||| ||| |||
Sbjct: 338 gagacaggaaagcttgttgtttacattcctcaagtctgtgaagtaggctacaaggattca 397

                                                                       
Query: 274 tcagtcttgcgtttctccaccagtgtgtctggttatttagagaaaggcaagttaacagac 333
           ||||| || || |||| |||||  ||| |||||||| | |||||||| ||| || |||||
Sbjct: 398 tcagttttacgcttcttcaccaccgtgactggttatctggagaaaggaaagctagcagac 457

                                                                       
Query: 334 attgagggaatgaaaaccaaagtgctgatctgggcaaaagtgaccaccattacatctgag 393
           || ||||||||||| || |||||| ||||||||| ||||||||| |||||| | || |||
Sbjct: 458 atagagggaatgaagacaaaagtgttgatctgggtaaaagtgacaaccatttcctcggag 517

                                                                       
Query: 394 ggatccaagctccatttctcggctggaatgaagaaaacgaggagaaaggaggcatatgag 453
           ||||| |||||| || |  | ||||| ||||||||||| ||||| | ||| |||||||| 
Sbjct: 518 ggatcgaagctctatgtgactgctggcatgaagaaaacaaggagtagggaagcatatgaa 577

                                               
Query: 454 gtttctagagatggtgtaagcgtagataaattctaa 489
           ||| | ||||||||| || |  ||||||| ||||||
Sbjct: 578 gttacaagagatggtatatgtatagataagttctaa 613