Miyakogusa Predicted Gene
- Lj1g3v2372130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2372130.1 Non Chatacterized Hit- tr|B9T1I6|B9T1I6_RICCO
Protein sco1, putative OS=Ricinus communis
GN=RCOM_018,80,0,SCO1/SENC,Copper chaperone SCO1/SenC;
SCO1-SenC,Copper chaperone SCO1/SenC;
Thioredoxin-like,Thiored,CUFF.28928.1
(591 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome... 1045 0.0
gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome... 297 4e-80
gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome... 297 4e-80
>gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1232
Score = 1045 bits (527), Expect = 0.0
Identities = 547/551 (99%), Gaps = 2/551 (0%)
Strand = Plus / Plus
Query: 43 gacataaataatgcttcagaggcagtgaagcatggaccttccgcgggaaaagctgcaatt 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gacataaataatgcttcagaggcagtgaagcatggaccttccgcgggaaaagctgcaatt 514
Query: 103 gggggtccatttcaccttaccaaccatcatgggaagcgcgttactgaaaaggacttcttg 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gggggtccatttcaccttaccaaccatcatgggaagcgcgttactgaaaaggacttcttg 574
Query: 163 ggaaagtggacagtgatgtatttt-ggatttactcactgcccagatatctgccctgatga 221
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 575 ggaaagtggacagtgatgtatttttggatttactcactgcccagatatctgccctgatga 634
Query: 222 acttcagaa-gttagcagttgcagttgataaaataaaggagaaatctggaattgaaattg 280
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 acttcagaaagttagcagttgcagttgataaaataaaggagaaatctggaattgaaattg 694
Query: 281 tgccagtttttatctctgttgatcctgagagggataccgttgagcaagtcagtgaatacg 340
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 695 tgccagtttttatctctgttgatcctgagaggggtaccgttgagcaagtcagtgaatacg 754
Query: 341 tcaaagaatttcatccaaagttaattggattaactggtagctcagatgagataaagagcg 400
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tcaaagaatttcttccaaagttaattggattaactggtagctcagatgagataaagagcg 814
Query: 401 tagctcgtgcatatcgtgtttattacatgaagacagcagaagaggactcagattatcttg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tagctcgtgcatatcgtgtttattacatgaagacagcagaagaggactcagattatcttg 874
Query: 461 ttgatcactccatagttatgtacttgatggggcctgacatgaattatgtaaagtttttcg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ttgatcactccatagttatgtacttgatggggcctgacatgaattatgtaaagtttttcg 934
Query: 521 gcaagaacaatgatgctgactcacttgctgatggaatagttaaagagataaagcagtata 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gcaagaacaatgatgctgactcacttgctgatggaatagttaaagagataaagcagtata 994
Query: 581 agaattaatta 591
|||||||||||
Sbjct: 995 agaattaatta 1005
>gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 572
Score = 297 bits (150), Expect = 4e-80
Identities = 198/214 (92%)
Strand = Plus / Plus
Query: 43 gacataaataatgcttcagaggcagtgaagcatggaccttccgcgggaaaagctgcaatt 102
|||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||
Sbjct: 209 gacatacataatgcttagaaggcagtgaagcctggaccttatgcgggaaaagctgcaatt 268
Query: 103 gggggtccatttcaccttaccaaccatcatgggaagcgcgttactgaaaaggacttcttg 162
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 269 gggggtccatttcaccttaccaaccatcatgggaagcacgttactgtaaaggacttcttg 328
Query: 163 ggaaagtggacagtgatgtattttggatttactcactgcccagatatctgccctgatgaa 222
||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 329 ggaaagtggacagtgatgtattttggatttagtcactgcccaagtatctgctctgatgaa 388
Query: 223 cttcagaagttagcagttgcagttgataaaataa 256
|| || |||||||||| |||||||||||||||||
Sbjct: 389 ctacataagttagcagatgcagttgataaaataa 422
>gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 856
Score = 297 bits (150), Expect = 4e-80
Identities = 198/214 (92%)
Strand = Plus / Plus
Query: 43 gacataaataatgcttcagaggcagtgaagcatggaccttccgcgggaaaagctgcaatt 102
|||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||
Sbjct: 279 gacatacataatgcttagaaggcagtgaagcctggaccttatgcgggaaaagctgcaatt 338
Query: 103 gggggtccatttcaccttaccaaccatcatgggaagcgcgttactgaaaaggacttcttg 162
|||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 339 gggggtccatttcaccttaccaaccatcctgggaagcacgttactgtaaaggacttcttg 398
Query: 163 ggaaagtggacagtgatgtattttggatttactcactgcccagatatctgccctgatgaa 222
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 399 ggaaagtggacagtgatgtattttggatttagtcactgcccaagtatctgccctgatgaa 458
Query: 223 cttcagaagttagcagttgcagttgataaaataa 256
|| || |||||||||| |||||||||||||||||
Sbjct: 459 ctacataagttagcagatgcagttgataaaataa 492