Miyakogusa Predicted Gene
- Lj1g3v2370090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2370090.1 Non Chatacterized Hit- tr|I1JLD2|I1JLD2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6433
PE=,85.61,0,Acyl-CoA_dh_N,Acyl-CoA dehydrogenase, N-terminal;
Acyl-CoA_dh_1,Acyl-CoA oxidase/dehydrogenase, type,CUFF.28933.1
(1239 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59526 homologue to UniRef100_A7Y7F6 Cluster: Acyl-CoA... 1106 0.0
gnl|LJGI|GO009790 similar to UniRef100_A7Y7F6 Cluster: Acyl-CoA ... 1098 0.0
gnl|LJGI|DC595527 similar to UniRef100_A7QHP9 Cluster: Chromosom... 248 7e-65
gnl|LJGI|TC72226 homologue to UniRef100_A7QHP9 Cluster: Chromoso... 176 2e-43
gnl|LJGI|BW630406 similar to UniRef100_A7Y7F6 Cluster: Acyl-CoA ... 167 2e-40
>gnl|LJGI|TC59526 homologue to UniRef100_A7Y7F6 Cluster: Acyl-CoA oxidase; n=1; Glycine
max|Rep: Acyl-CoA oxidase - Glycine max (Soybean),
partial (98%)
Length = 1711
Score = 1106 bits (558), Expect = 0.0
Identities = 1037/1199 (86%)
Strand = Plus / Plus
Query: 34 atgccttcatattttaatttaccagcacttgatgtttctgtggcatttccacaagcaact 93
|||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||
Sbjct: 148 atgccttcctattttaatttaccaccactggatgtttctgctgcatttccacaagcaact 207
Query: 94 cctgcttctacttttcctccttgtgcttcagattattttcaattcgatgatttattgaca 153
|| || ||||| |||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 208 ccagcatctacatttcctccttgtgcttcagattattttcaatttgatgacttgctgaca 267
Query: 154 ccggaggagcaagcagttaggatgaaagtgagaaagtgtatggaaaaggaaattgctccc 213
|| |||||||| || | | || |||||| ||| ||||||||||||| | ||||||||
Sbjct: 268 ccagaggagcaggccatcaagaagaaagttagagagtgtatggaaaaaaatattgctcca 327
Query: 214 ataatgacccagtactgggagaaggccaatttcccatttcatgtcattccgaagtttgct 273
||||||||| |||| |||||||||||||| |||||||||||||| ||||| ||| ||| |
Sbjct: 328 ataatgaccgagtattgggagaaggccaagttcccatttcatgttattccaaagcttggt 387
Query: 274 gaactgcatattgctggtggcacaatcaagggttatggttgtcctggtctttccatgctt 333
| | ||| ||||||||||||||||||||||||||| |||||||| |||||||| || |
Sbjct: 388 gcattgcgtattgctggtggcacaatcaagggttacggttgtcccggtctttctataact 447
Query: 334 gggagtgctgttgctgcagcagaaattgctagagttgatgcaagcttttcagttttcatt 393
|| |||||| | ||| |||||| |||| || ||||||||||||| |||| ||| |||
Sbjct: 448 ggaagtgctatagctattgcagaagttgcaagggttgatgcaagctgttcaacttttatt 507
Query: 394 ttggtccattcatgcttggcaatgctcaccattgcattgtgtggatctgaagctcagaag 453
||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 508 ttggtccattcatccttggcaatgctcactattgcattgtgtggatcagaagctcagaag 567
Query: 454 caaaagtacctaccttctttggcagagctaaaaactatatcatgttgggctttgactgaa 513
|||| || || ||||| ||||| || || |||||||| ||||||||||||||||||||
Sbjct: 568 gaaaaatatctgccttcgctggcacagttagaaactatagcatgttgggctttgactgaa 627
Query: 514 cctgattatggaagtgatgccagttctttgaagaccacagcaaccaaggtggaaggtggt 573
||||| |||||||||||||||||| ||||||||||||| ||||| ||||| ||||| |||
Sbjct: 628 cctgactatggaagtgatgccagtgctttgaagaccactgcaactaaggtagaaggaggt 687
Query: 574 tggatccttgagggccaaaagaggtggataggaaacagtacatttgctgatttgttggtt 633
|||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 688 tggatcctggagggccaaaagcggtggataggaaacagtacatttgctgatctgttggtt 747
Query: 634 atcttcgccaggaataccacaacaaatcaaataaatggctatattgtnnnnnnngatgca 693
|||| || |||||| | ||||||||||| |||||||| |||||||| ||||||
Sbjct: 748 gtctttgctaggaatgcgacaacaaatcagataaatggatatattgtaaaaaaggatgca 807
Query: 694 cctggtttaacagccacaaaaatagagaataaaattggacttaggatcgtacaaaatgga 753
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 808 cctggtttaacagtcacaaaaatagagaataaaattggacttaggattgtacaaaatgga 867
Query: 754 gacattgttttgaagaaactttttgtccctgatgaggatagaatagcagaactcaattct 813
||||||||| ||| ||| |||||||| |||| ||||| ||| |||||| || | |||
Sbjct: 868 gacattgttatgagaaaagtttttgtctctgacgaggacagagtagcaggtcttgactct 927
Query: 814 tttcaagacacaaacaaggtacttgctgcttctcgtgtaatggtttgctggcagccaatt 873
||||| || | || ||||||||||||| ||| || ||||||||| ||||| || |||
Sbjct: 928 tttcaggatataagtaaggtacttgctgtttcacgagtaatggttgcttggcaacctatt 987
Query: 874 ggtgtatcaatgggcatctatgatatgtgtcataggtaccttaaggaaaggaaacagttt 933
||| |||||||||||||||| || |||||||||||||| || ||||| ||||||||||||
Sbjct: 988 ggtatatcaatgggcatctacgacatgtgtcataggtatctaaaggagaggaaacagttt 1047
Query: 934 ggagcaccattagcagctttccaaatcaaccaacagaaacttgttcaaatgcttggtaac 993
|||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 1048 ggagcaccattagcagctttccaaatcaaccaacagaaacttgtccagatgctcggtaat 1107
Query: 994 gttcaagcaatggttcttgttggttggcgcctgtgtaagttgtatgagagtggtaaactg 1053
||||||| ||| |||||||||| |||||||| || || |||||||||| ||||||| ||
Sbjct: 1108 attcaagctatgattcttgttggctggcgcctttgcaaattgtatgagactggtaaaatg 1167
Query: 1054 acgccgggtcatgctagcttggggaagtcgtggatctccttgagggcaagagaaacagct 1113
|| ||||| ||||||| ||| ||||| |||||| ||||||| |||||||||||||||
Sbjct: 1168 actgtaggtcaggctagctcgggaaagtcatggatcaccttgagagcaagagaaacagct 1227
Query: 1114 gccctggggcgagagttgcttggtggcaatggaattttggctgattatcttgtggcaaag 1173
|| || ||| |||| ||||| ||||||||||| ||||||||||||| |||||||||||||
Sbjct: 1228 gctctagggagagaattgctcggtggcaatggtattttggctgattttcttgtggcaaag 1287
Query: 1174 gcattttgtgacttagaaccgatctatacctttgaaggaacctatgacatcaacacctt 1232
||||| ||||| |||||||| |||||||||| |||||| || ||||| || ||||||||
Sbjct: 1288 gcattctgtgatttagaacccatctatacctatgaaggcacttatgatattaacacctt 1346
>gnl|LJGI|GO009790 similar to UniRef100_A7Y7F6 Cluster: Acyl-CoA oxidase; n=1; Glycine
max|Rep: Acyl-CoA oxidase - Glycine max (Soybean),
partial (44%)
Length = 617
Score = 1098 bits (554), Expect = 0.0
Identities = 576/581 (99%), Gaps = 3/581 (0%)
Strand = Plus / Plus
Query: 1 atgactggtcccaatccagatatgaattcaaagatgccttcatattttaatttaccagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atgactggtcccaatccagatatgaattcaaagatgccttcatattttaatttaccagca 99
Query: 61 cttgatgtttctgtggcatttccacaagcaactcctgcttctacttttcctccttgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cttgatgtttctgtggcatttccacaagcaactcctgcttctacttttcctccttgtgct 159
Query: 121 tcagattattttcaattcgatgatttattgacaccggaggagcaagcagttaggatgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tcagattattttcaattcgatgatttattgacaccggaggagcaagcagttaggatgaaa 219
Query: 181 gtgagaaagtgtatggaaaaggaaattgctcccataatgacccagtactgggagaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 220 gtgagaaagtgtatggaaaaggaaattgctcccataatgacccagtactgggagagggcc 279
Query: 241 aatttcccatttcatgtcattccgaagtttgctgaactgcatattgctggtggcacaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aatttcccatttcatgtcattccgaagtttgctgaactgcatattgctggtggcacaatc 339
Query: 301 aagggttatggttgtcctggtctttccatgcttgggagtgctgttgctgcagcagaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aagggttatggttgtcctggtctttccatgcttgggagtgctgttgctgcagcagaaatt 399
Query: 361 gctagagttgatgcaagcttttcagttttcattttggtccattcatgcttggcaatgctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gctagagttgatgcaagcttttcagttttcattttggtccattcatgcttggcaatgctc 459
Query: 421 accattgcattgtgtggatctgaagctcagaagcaaaagtacctaccttctttggcagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 accattgcattgtgtggatctgaagctcagaagcaaaagtacctaccttctttggcagag 519
Query: 481 ctaaaaactatatcatgttgggctttgactgaacctgattatggaagtgatgccagttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctaaaaactatatcatgttgggctttgactgaacctgattatggaagtgatgccagttct 579
Query: 541 ttgaagaccacagcaaccaaggtggaaggtggttggatcct 581
||||||||||||||||| | |||||| |||||||||||||
Sbjct: 580 ttgaagaccacagcaac--aagtggaa-gtggttggatcct 617
>gnl|LJGI|DC595527 similar to UniRef100_A7QHP9 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 519
Score = 248 bits (125), Expect = 7e-65
Identities = 239/277 (86%)
Strand = Plus / Minus
Query: 956 aaatcaaccaacagaaacttgttcaaatgcttggtaacgttcaagcaatggttcttgttg 1015
|||||||||||||||||||||| || ||||| ||||| ||||||| ||| |||||||||
Sbjct: 519 aaatcaaccaacagaaacttgtccagatgctcggtaatattcaagctatgattcttgttg 460
Query: 1016 gttggcgcctgtgtaagttgtatgagagtggtaaactgacgccgggtcatgctagcttgg 1075
| |||||||| || || |||||||||| ||||||| |||| ||||| ||||||| ||
Sbjct: 459 gctggcgcctttgcaaattgtatgagactggtaaaatgactgtaggtcaggctagctcgg 400
Query: 1076 ggaagtcgtggatctccttgagggcaagagaaacagctgccctggggcgagagttgcttg 1135
| ||||| |||||| ||||||| ||||||||||||||||| || ||| |||| ||||| |
Sbjct: 399 gaaagtcatggatcaccttgagagcaagagaaacagctgctctagggagagaattgctcg 340
Query: 1136 gtggcaatggaattttggctgattatcttgtggcaaaggcattttgtgacttagaaccga 1195
|||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||| |
Sbjct: 339 gtggcaatggtattttggctgattttcttgtggcaaaggcattctgtgatttagaaccca 280
Query: 1196 tctatacctttgaaggaacctatgacatcaacacctt 1232
||||||||| |||||| || ||||| || ||||||||
Sbjct: 279 tctatacctatgaaggcacttatgatattaacacctt 243
>gnl|LJGI|TC72226 homologue to UniRef100_A7QHP9 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 684
Score = 176 bits (89), Expect = 2e-43
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 898 atgtgtcataggtaccttaaggaaaggaaacagtttggagcaccattagcagctttccaa 957
|||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6 atgtgtcataggtatctaaaggagaggaaacagtttggagcaccattagcagctttccaa 65
Query: 958 atcaaccaacagaaacttgttcaaatgcttggtaacgttcaagcaatggttcttgttggt 1017
|||||||||||||||||||| || ||||| ||||| ||||||| ||| ||||||||||
Sbjct: 66 atcaaccaacagaaacttgtccagatgctcggtaatattcaagctatgattcttgttggc 125
Query: 1018 tggcgcctgtgtaagttgtatgaga 1042
|||||||| || || ||||||||||
Sbjct: 126 tggcgcctttgcaaattgtatgaga 150
Score = 161 bits (81), Expect = 1e-38
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 1084 tggatctccttgagggcaagagaaacagctgccctggggcgagagttgcttggtggcaat 1143
|||||| ||||||| ||||||||||||||||| || ||| |||| ||||| |||||||||
Sbjct: 157 tggatcaccttgagagcaagagaaacagctgctctagggagagaattgctcggtggcaat 216
Query: 1144 ggaattttggctgattatcttgtggcaaaggcattttgtgacttagaaccgatctatacc 1203
|| ||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 217 ggtattttggctgattttcttgtggcaaaggcattctgtgatttagaacccatctatacc 276
Query: 1204 tttgaaggaacctatgacatcaacacctt 1232
| |||||| || ||||| || ||||||||
Sbjct: 277 tatgaaggcacttatgatattaacacctt 305
>gnl|LJGI|BW630406 similar to UniRef100_A7Y7F6 Cluster: Acyl-CoA oxidase; n=1; Glycine
max|Rep: Acyl-CoA oxidase - Glycine max (Soybean),
partial (20%)
Length = 470
Score = 167 bits (84), Expect = 2e-40
Identities = 172/200 (86%), Gaps = 1/200 (0%)
Strand = Plus / Plus
Query: 34 atgccttcatattttaatttaccagcacttgatgtttctgtggcatttccacaagcaact 93
|||||||| ||||||||||||||| |||| |||||| ||| ||||||||||||||||||
Sbjct: 272 atgccttcctattttaatttaccaccactggatgttcctgctgcatttccacaagcaact 331
Query: 94 cctgcttctacttttcctccttgtgcttcagattattttcaattcgatgatttattgaca 153
|| || ||||| |||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 332 ccagcatctacatttcctccttgtgcttcagattattttcaatttgatgacttgctgaca 391
Query: 154 ccggaggagcaagcagttaggatgaaagtgagaaagtgtatggaaaaggaaattgctccc 213
|| |||||||| || | | || |||||| ||| ||||||||||||| | ||||||||
Sbjct: 392 ccagaggagcaggccatcaagaagaaagttagagagtgtatggaaaa-aatattgctcca 450
Query: 214 ataatgacccagtactggga 233
||||||||| |||| |||||
Sbjct: 451 ataatgaccgagtattggga 470