Miyakogusa Predicted Gene
- Lj1g3v2348940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2348940.1 tr|G7ICR7|G7ICR7_MEDTR Zinc finger protein-like
protein OS=Medicago truncatula GN=MTR_1g071310 PE=4 ,67.96,0,seg,NULL;
no description,Zinc finger C2H2-type/integrase DNA-binding domain;
zf-C2H2_jaz,Zinc finger,CUFF.28915.1
(1326 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 155 8e-37
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 153 3e-36
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 135 8e-31
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 98 2e-19
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 98 2e-19
gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finge... 82 1e-14
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 58 1e-07
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 155 bits (78), Expect = 8e-37
Identities = 180/214 (84%)
Strand = Plus / Plus
Query: 412 acaggaattaagaaacactactgcagaaaacatggagagaagaagtggaaatgtgacaag 471
|||||||| |||||||||| | ||||||||||||| |||||||||||||| ||||| |||
Sbjct: 338 acaggaatcaagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtgagaag 397
Query: 472 tgctcaaagatctatgctgttcagtcagattggaaagctcactctaaaacctgtggtact 531
||||| |||| || |||||||| || |||||||| || || | || | ||||| |||
Sbjct: 398 tgctccaagaaatacgctgttcattccgattggaaggcccatgccaagatttgtgggact 457
Query: 532 agagagtatagatgtgattgtggaacccttttttccaggaaggacagcttcataactcac 591
|||||||| | ||||| ||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 458 agagagtacaagtgtgactgtggcacacttttctccaggaaggacagcttcataactcat 517
Query: 592 agagcattctgtgatgcattggctgaagaaagtg 625
||||| || ||||| | ||||||||||||||||
Sbjct: 518 agagctttttgtgacactttggctgaagaaagtg 551
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 153 bits (77), Expect = 3e-36
Identities = 179/213 (84%)
Strand = Plus / Plus
Query: 418 attaagaaacactactgcagaaaacatggagagaagaagtggaaatgtgacaagtgctca 477
|||||||| || | ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 401 attaagaagcatttctgcagaaaacatggcgagaagaagtggaaatgtgacaagtgctct 460
Query: 478 aagatctatgctgttcagtcagattggaaagctcactctaaaacctgtggtactagagag 537
|||| ||||| ||||| || ||||||||||||||||| || | || ||||| ||||||
Sbjct: 461 aagaaatatgcggttcaatcggattggaaagctcactccaagatttgcggtaccagagag 520
Query: 538 tatagatgtgattgtggaacccttttttccaggaaggacagcttcataactcacagagca 597
|||| ||| ||||||||||| | ||||| |||| ||| |||||||| || || || ||
Sbjct: 521 tataaatgcgattgtggaactttgttttcaaggagggatagcttcatcacgcatagggcg 580
Query: 598 ttctgtgatgcattggctgaagaaagtgcaaga 630
|| |||||||| || || || ||||||||||||
Sbjct: 581 ttttgtgatgcgttagcagaggaaagtgcaaga 613
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 135 bits (68), Expect = 8e-31
Identities = 165/196 (84%), Gaps = 1/196 (0%)
Strand = Plus / Plus
Query: 435 cagaaaacatggagagaagaagtggaaatgtgacaagtgctcaaagatctatgctgttca 494
|||||| ||||| |||||||||||||||||||| |||||||| |||| ||||| |||||
Sbjct: 11 cagaaagcatggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttca 70
Query: 495 gtcagattggaaagctcactctaaaacctgtggtactagagagtatagatgtgattgtgg 554
||||| |||||||||||||| |||||||||||||| ||||| || |||||||| |||||
Sbjct: 71 atcagactggaaagctcactccaaaacctgtggtacaagagaatacagatgtgactgtgg 130
Query: 555 aacccttttttccaggaaggacagcttcataactcacagagcattctgtgatgcattggc 614
| || | ||||| ||||| |||||||| |||||||| |||||||||||||| ||
Sbjct: 131 aggcc-gctgggcaggagggacaatttcataacccacagagccttctgtgatgcattagc 189
Query: 615 tgaagaaagtgcaaga 630
|| || |||||||||
Sbjct: 190 agaggagagtgcaaga 205
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 97.6 bits (49), Expect = 2e-19
Identities = 304/389 (78%)
Strand = Plus / Plus
Query: 232 gtgtgtgagatctgcaacaagggtttccagagagaccagaaccttcagcttcataggagg 291
|||||||||||||||||||| || || || |||||||| ||||| || |||||| || |
Sbjct: 532 gtgtgtgagatctgcaacaaaggctttcaaagagaccaaaacctccaacttcatcggcga 591
Query: 292 ggacataacctcccatggaagttgaagcaaaggaacagcaaagatatcaagaagaaagcc 351
|| || ||||| || |||||| |||||||||| | || | ||| | |||| | |
Sbjct: 592 ggccacaacctgccgtggaagctgaagcaaagaaccaccgcagaggttcggaagcgggtc 651
Query: 352 tatgtttgtccagagccttcatgtgttcaccacaacccagcaagggctcttggggatctt 411
|| || ||||| || ||||||||||| ||||||| ||| ||||| || || || || ||
Sbjct: 652 tacgtctgtcctgaaccttcatgtgtccaccacagcccggcaagagcactgggcgacctc 711
Query: 412 acaggaattaagaaacactactgcagaaaacatggagagaagaagtggaaatgtgacaag 471
|| || |||||||| |||| ||||||||| || || ||||| || |||||||||||||||
Sbjct: 712 actggcattaagaagcacttctgcagaaagcacggcgagaaaaaatggaaatgtgacaag 771
Query: 472 tgctcaaagatctatgctgttcagtcagattggaaagctcactctaaaacctgtggtact 531
||||| |||| || |||||||| || || |||| ||| ||||| |||| ||||| ||
Sbjct: 772 tgctccaagaagtacgctgttcaatctgactggagagcacactccaaaatatgtggcacg 831
Query: 532 agagagtatagatgtgattgtggaacccttttttccaggaaggacagcttcataactcac 591
| || |||| ||||| ||||||||| | |||||||| | || || ||||| || |||
Sbjct: 832 aaggaatataagtgtgactgtggaaccatcttttccagaagagatagtttcatcacccac 891
Query: 592 agagcattctgtgatgcattggctgaaga 620
||||| ||||| || ||| || |||||||
Sbjct: 892 agagctttctgcgacgcactgtctgaaga 920
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 97.6 bits (49), Expect = 2e-19
Identities = 169/209 (80%)
Strand = Plus / Plus
Query: 406 gatcttacaggaattaagaaacactactgcagaaaacatggagagaagaagtggaaatgt 465
||||| || |||||||| || |||| ||||||||| || || |||||||||||||||||
Sbjct: 452 gatctcaccggaattaaaaagcacttctgcagaaagcacggtgagaagaagtggaaatgc 511
Query: 466 gacaagtgctcaaagatctatgctgttcagtcagattggaaagctcactctaaaacctgt 525
|| || ||||| |||| ||||| ||||| || ||||||||||||||||| || ||
Sbjct: 512 gagaaatgctccaagaaatatgcagttcaatctgattggaaagctcactccaaggtttgc 571
Query: 526 ggtactagagagtatagatgtgattgtggaacccttttttccaggaaggacagcttcata 585
||||| |||||||||| |||||| || || || | ||||| |||| ||| ||||||||
Sbjct: 572 ggtaccagagagtataaatgtgactgcggcacggtgttttcgaggagggatagcttcatt 631
Query: 586 actcacagagcattctgtgatgcattggc 614
||||| ||||| || || ||||| |||||
Sbjct: 632 actcatagagctttttgcgatgcgttggc 660
>gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (17%)
Length = 805
Score = 81.8 bits (41), Expect = 1e-14
Identities = 146/181 (80%)
Strand = Plus / Plus
Query: 140 tcaagaaaaagagaagcctccctggaaacccagacccagatgctgaagtgatagctttat 199
|||||| |||||||| ||||||||| |||||||||||||| |||||||| | || | |
Sbjct: 624 tcaagagaaagagaaacctccctggcaacccagacccagaagctgaagttgtggccatgt 683
Query: 200 cccccaagacccttctagctaccaatagatttgtgtgtgagatctgcaacaagggtttcc 259
| || ||| | ||| | || || || || || | ||||||||||||||||| || ||||
Sbjct: 684 ctccaaagtctcttatggcaacaaacaggttcttatgtgagatctgcaacaaaggattcc 743
Query: 260 agagagaccagaaccttcagcttcataggaggggacataacctcccatggaagttgaagc 319
| ||||| ||||| |||||||||||||| || || || || | ||||||||||||||||
Sbjct: 744 aaagagatcagaatcttcagcttcatagaagagggcacaatttaccatggaagttgaagc 803
Query: 320 a 320
|
Sbjct: 804 a 804
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 58.0 bits (29), Expect = 1e-07
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 421 aagaaacactactgcagaaaacatggagagaagaagtggaaatgtgacaagtgctcaaag 480
||||| |||| | ||||||| || || |||||||||||||| ||||| |||||||| |||
Sbjct: 258 aagaagcacttcagcagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaag 199
Query: 481 atctatgctgttcagtcagattggaaagctcac 513
| || || || | ||||||||||||||||||
Sbjct: 198 aaatacgcagtcccatcagattggaaagctcac 166