Miyakogusa Predicted Gene

Lj1g3v2338920.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2338920.1 tr|I3XD95|I3XD95_RHIFR NAD(P) transhydrogenase
subunit beta OS=Sinorhizobium fredii USDA 257
GN=pntB,40.48,7,seg,NULL,CUFF.28917.1
         (207 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63552 similar to UniRef100_A7QHQ1 Cluster: Chromosome...   410   e-114
gnl|LJGI|TC59117 similar to UniRef100_A7QHQ1 Cluster: Chromosome...   402   e-112
gnl|LJGI|BI420722 weakly similar to UniRef100_A7QHQ1 Cluster: Ch...   206   4e-53

>gnl|LJGI|TC63552 similar to UniRef100_A7QHQ1 Cluster: Chromosome chr8 scaffold_99,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_99, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 810

 Score =  410 bits (207), Expect = e-114
 Identities = 207/207 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctttaaccttttcgctcctgcgccacctcccaaaccaacccatcaccaccgtcacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atgtctttaaccttttcgctcctgcgccacctcccaaaccaacccatcaccaccgtcacc 215

                                                                       
Query: 61  atcccattcctcagcctcaaccgcatcttcagaaaccccttgacttccctgcgcagaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atcccattcctcagcctcaaccgcatcttcagaaaccccttgacttccctgcgcagaaac 275

                                                                       
Query: 121 agagtgggattggtccaattggggttggcaatactgtcaacattgacttctgcacttcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 agagtgggattggtccaattggggttggcaatactgtcaacattgacttctgcacttcct 335

                                      
Query: 181 gctcttacaagggaaatgcggtaacag 207
           |||||||||||||||||||||||||||
Sbjct: 336 gctcttacaagggaaatgcggtaacag 362


>gnl|LJGI|TC59117 similar to UniRef100_A7QHQ1 Cluster: Chromosome chr8 scaffold_99,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_99, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (88%)
          Length = 1033

 Score =  402 bits (203), Expect = e-112
 Identities = 206/207 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctttaaccttttcgctcctgcgccacctcccaaaccaacccatcaccaccgtcacc 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36  atgtctttgaccttttcgctcctgcgccacctcccaaaccaacccatcaccaccgtcacc 95

                                                                       
Query: 61  atcccattcctcagcctcaaccgcatcttcagaaaccccttgacttccctgcgcagaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  atcccattcctcagcctcaaccgcatcttcagaaaccccttgacttccctgcgcagaaac 155

                                                                       
Query: 121 agagtgggattggtccaattggggttggcaatactgtcaacattgacttctgcacttcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 agagtgggattggtccaattggggttggcaatactgtcaacattgacttctgcacttcct 215

                                      
Query: 181 gctcttacaagggaaatgcggtaacag 207
           |||||||||||||||||||||||||||
Sbjct: 216 gctcttacaagggaaatgcggtaacag 242


>gnl|LJGI|BI420722 weakly similar to UniRef100_A7QHQ1 Cluster: Chromosome chr8
           scaffold_99, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_99, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (19%)
          Length = 521

 Score =  206 bits (104), Expect = 4e-53
 Identities = 113/116 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctttaaccttttcgctcctgcgccacctcccaaaccaacccatcaccaccgtcacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 52  atgtctttaaccttttcgctcctgcgccacctcccaaaccaacccatcacctccgtcact 111

                                                                   
Query: 61  atcccattcctcagcctcaaccgcatcttcagaaaccccttgacttccctgcgcag 116
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ttcccattcctcagcctcaaccgcatcttcagaaaccccttgacttccctgcgcag 167



 Score =  157 bits (79), Expect = 3e-38
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                       
Query: 113 gcagaaacagagtgggattggtccaattggggttggcaatactgtcaacattgacttctg 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcagaaacagagtgggattggtccaattggggttggcaatactgtcaacattgacttctg 347

                              
Query: 173 cacttcctgctcttacaag 191
           |||||||||||||||||||
Sbjct: 348 cacttcctgctcttacaag 366