Miyakogusa Predicted Gene

Lj1g3v2327880.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2327880.1 tr|Q0JAF2|Q0JAF2_ORYSJ Os04g0602300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os04g06023,42.27,8e-18,seg,NULL; coiled-coil,NULL; TRANSCRIPTION
FACTOR,NULL; ZINC FINGER PROTEIN WITH KRAB AND SCAN
DOMAIN,CUFF.28907.1
         (882 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598837 similar to UniRef100_A7QHQ5 Cluster: Chromosom...   682   0.0  
gnl|LJGI|TC76493 similar to UniRef100_A7QHQ5 Cluster: Chromosome...   291   4e-78

>gnl|LJGI|DC598837 similar to UniRef100_A7QHQ5 Cluster: Chromosome chr8 scaffold_99,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_99, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 576

 Score =  682 bits (344), Expect = 0.0
 Identities = 349/351 (99%)
 Strand = Plus / Plus

                                                                       
Query: 102 cgctcataacataatcgctagtgctagtgtaagcgcggatgtaacggataggttccctca 161
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cgctcataacataatcgctagtgctagtgtaagcgcggatgtaacggataggttccctca 285

                                                                       
Query: 162 atggagtattcaagagacaaaggagttcctcgtgatccgtgcagagctggatcagacttt 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atggagtattcaagagacaaaggagttcctcgtgatccgtgcagagctggatcagacttt 345

                                                                       
Query: 222 catggagacaaagaggaacaagcagctttgggaagtcatctccaaccagatgaaggaaaa 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 catggagacaaagaggaacaagcagctttgggaagtcatctccaaccagatgaaggaaaa 405

                                                                       
Query: 282 gggttaccatagaagtgcagagcagtgcaagtgcaagtggaaaaacctcgttacccgcta 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gggttaccatagaagtgcagagcagtgcaagtgcaagtggaaaaacctcgttacccgcta 465

                                                                       
Query: 342 taagggatgtgaaacgatggagcctgaagcctcaaggcagcaatttccattttacaatga 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 taagggatgtgaaacgatggagcctgaagcctcaaggcagcaatttccattttacaatga 525

                                                              
Query: 402 tcttcaagcgattttcacggtgaggatgcagagaatgttgtgggctgaagc 452
           ||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tcttncagcgattttcacggtgaggatgcagagaatgttgtgggctgaagc 576



 Score = 79.8 bits (40), Expect = 3e-14
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                   
Query: 1   atggagggtcatcaactccatcaccaacaccatcgacgaa 40
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggagggtcatcaactccatcaccaacaccatcgacgaa 164


>gnl|LJGI|TC76493 similar to UniRef100_A7QHQ5 Cluster: Chromosome chr8 scaffold_99,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_99, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 635

 Score =  291 bits (147), Expect = 4e-78
 Identities = 147/147 (100%)
 Strand = Plus / Plus

                                                                       
Query: 595 ggtggtagtagcaacttgaaggagattctagaggagttcatgaggcaacaaatgcaaatg 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ggtggtagtagcaacttgaaggagattctagaggagttcatgaggcaacaaatgcaaatg 61

                                                                       
Query: 655 gaagctcagtggatggaggcttatgaagcaagggagagtgagagaaggttgagggagatg 714
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  gaagctcagtggatggaggcttatgaagcaagggagagtgagagaaggttgagggagatg 121

                                      
Query: 715 gagtggaggcaagccatggaagcattg 741
           |||||||||||||||||||||||||||
Sbjct: 122 gagtggaggcaagccatggaagcattg 148



 Score =  103 bits (52), Expect = 2e-21
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                               
Query: 831 tgctctaatcacagctttgctcaacaagctaagaagagaagatatgtaggaa 882
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgctctaatcacagctttgctcaacaagctaagaagagaagatatgtaggaa 289