Miyakogusa Predicted Gene
- Lj1g3v2326720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2326720.1 Non Chatacterized Hit- tr|C6T7X8|C6T7X8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1699
PE=,92.05,0,ZF_PHD_1,Zinc finger, PHD-type, conserved site; SUBFAMILY
NOT NAMED,NULL; CPG BINDING PROTEIN,NULL; ,CUFF.28910.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62906 homologue to UniRef100_A0FK64 Cluster: PHD4; n=... 1433 0.0
gnl|LJGI|FS322647 homologue to UniRef100_A0FK64 Cluster: PHD4; n... 1122 0.0
gnl|LJGI|TC64899 homologue to UniRef100_A0FK64 Cluster: PHD4; n=... 539 e-153
gnl|LJGI|BW594416 homologue to UniRef100_A0FK64 Cluster: PHD4; n... 335 2e-91
gnl|LJGI|AW719518 homologue to UniRef100_A7P4R4 Cluster: Chromos... 84 1e-15
gnl|LJGI|TC57893 homologue to UniRef100_A7P4R4 Cluster: Chromoso... 84 1e-15
gnl|LJGI|TC60545 similar to UniRef100_Q06A77 Cluster: PHD3; n=1;... 76 3e-13
gnl|LJGI|AV765272 similar to UniRef100_A0FK64 Cluster: PHD4; n=1... 70 2e-11
gnl|LJGI|TC64997 similar to UniRef100_A7P4R4 Cluster: Chromosome... 64 1e-09
gnl|LJGI|TC60251 homologue to UniRef100_Q06A73 Cluster: PHD1; n=... 62 5e-09
gnl|LJGI|TC77333 homologue to UniRef100_Q06A73 Cluster: PHD1; n=... 54 1e-06
>gnl|LJGI|TC62906 homologue to UniRef100_A0FK64 Cluster: PHD4; n=1; Medicago
truncatula|Rep: PHD4 - Medicago truncatula (Barrel
medic), partial (93%)
Length = 1169
Score = 1433 bits (723), Expect = 0.0
Identities = 723/723 (100%)
Strand = Plus / Plus
Query: 1 atggaaatggcttccagtccccgcaccgtcgaagagatcttcaaggatttcagtgctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggaaatggcttccagtccccgcaccgtcgaagagatcttcaaggatttcagtgctaga 218
Query: 61 aaaaccgctattgttcgcgctctcactcaagatgttgatgatttttacgggctctgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaaaccgctattgttcgcgctctcactcaagatgttgatgatttttacgggctctgtgat 278
Query: 121 ccagaaaaggataacttgtgtctttatggacatccaaatgaaagctgggaagtaacgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ccagaaaaggataacttgtgtctttatggacatccaaatgaaagctgggaagtaacgctg 338
Query: 181 ccagcggaggaagttccgccagagctccctgagccagctcttggaatcaattttgctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccagcggaggaagttccgccagagctccctgagccagctcttggaatcaattttgctaga 398
Query: 241 gatggcatgaatcgcagggattggctttctctggttgctgtgcacagtgattcgtggttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gatggcatgaatcgcagggattggctttctctggttgctgtgcacagtgattcgtggttg 458
Query: 301 ctttctgtggccttttatcttggagctcgtcttaaccgcaatgaaaggaaacgtttgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctttctgtggccttttatcttggagctcgtcttaaccgcaatgaaaggaaacgtttgttc 518
Query: 361 agtctgatcaatgactttcccaccgtgtttgaagttgtgactgacaggaaaccagctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 agtctgatcaatgactttcccaccgtgtttgaagttgtgactgacaggaaaccagctaaa 578
Query: 421 gacaagccagccacggatagtggaagcaaatccagaggaagcaccaagagatctagtgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gacaagccagccacggatagtggaagcaaatccagaggaagcaccaagagatctagtgat 638
Query: 481 gggcaagttaagagcaaccctaagtttgcagaggagggttatgaggaggaggatgatgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gggcaagttaagagcaaccctaagtttgcagaggagggttatgaggaggaggatgatgag 698
Query: 541 cacagtgaaaccctttgcgggagctgcggtggaaactacaatgccgacgagttttggatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cacagtgaaaccctttgcgggagctgcggtggaaactacaatgccgacgagttttggatt 758
Query: 601 gggtgcgacatatgcgagaggtggtaccatgggaagtgtgtgaagattacacctgcaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gggtgcgacatatgcgagaggtggtaccatgggaagtgtgtgaagattacacctgcaaag 818
Query: 661 gctgagagcataaagcaatataagtgcccatcatgcagcatgaggaggggcaggccctag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gctgagagcataaagcaatataagtgcccatcatgcagcatgaggaggggcaggccctag 878
Query: 721 ggc 723
|||
Sbjct: 879 ggc 881
>gnl|LJGI|FS322647 homologue to UniRef100_A0FK64 Cluster: PHD4; n=1; Medicago
truncatula|Rep: PHD4 - Medicago truncatula (Barrel
medic), partial (74%)
Length = 737
Score = 1122 bits (566), Expect = 0.0
Identities = 581/586 (99%), Gaps = 5/586 (0%)
Strand = Plus / Plus
Query: 1 atggaaatggcttccagtccccgcaccgtcgaagagatcttcaaggatttcagtgctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atggaaatggcttccagtccccgcaccgtcgaagagatcttcaaggatttcagtgctaga 216
Query: 61 aaaaccgctattgttcgcgctctcactcaagatgttgatgatttttacgggctctgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aaaaccgctattgttcgcgctctcactcaagatgttgatgatttttacgggctctgtgat 276
Query: 121 ccagaaaaggataacttgtgtctttatggacatccaaatgaaagctgggaagtaacgctg 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ccag-----gataacttgtgtctttatggacatccaaatgaaagctgggaagtaacgctg 331
Query: 181 ccagcggaggaagttccgccagagctccctgagccagctcttggaatcaattttgctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccagcggaggaagttccgccagagctccctgagccagctcttggaatcaattttgctaga 391
Query: 241 gatggcatgaatcgcagggattggctttctctggttgctgtgcacagtgattcgtggttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gatggcatgaatcgcagggattggctttctctggttgctgtgcacagtgattcgtggttg 451
Query: 301 ctttctgtggccttttatcttggagctcgtcttaaccgcaatgaaaggaaacgtttgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctttctgtggccttttatcttggagctcgtcttaaccgcaatgaaaggaaacgtttgttc 511
Query: 361 agtctgatcaatgactttcccaccgtgtttgaagttgtgactgacaggaaaccagctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agtctgatcaatgactttcccaccgtgtttgaagttgtgactgacaggaaaccagctaaa 571
Query: 421 gacaagccagccacggatagtggaagcaaatccagaggaagcaccaagagatctagtgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gacaagccagccacggatagtggaagcaaatccagaggaagcaccaagagatctagtgat 631
Query: 481 gggcaagttaagagcaaccctaagtttgcagaggagggttatgaggaggaggatgatgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gggcaagttaagagcaaccctaagtttgcagaggagggttatgaggaggaggatgatgag 691
Query: 541 cacagtgaaaccctttgcgggagctgcggtggaaactacaatgccg 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cacagtgaaaccctttgcgggagctgcggtggaaactacaatgccg 737
>gnl|LJGI|TC64899 homologue to UniRef100_A0FK64 Cluster: PHD4; n=1; Medicago
truncatula|Rep: PHD4 - Medicago truncatula (Barrel
medic), partial (93%)
Length = 1290
Score = 539 bits (272), Expect = e-153
Identities = 607/718 (84%), Gaps = 3/718 (0%)
Strand = Plus / Plus
Query: 6 aatggcttccagtccccgcaccgtcgaagagatcttcaaggatttcagtgctagaaaaac 65
|||||| ||||||||||||||||| ||||||||||||||||| | || ||| | | |
Sbjct: 290 aatggcgtccagtccccgcaccgttgaagagatcttcaaggactacaccgctcgcagaga 349
Query: 66 cgctattgttcgcgctctcactcaagatgttgatgatttttacgggctctgtgatccaga 125
|| || |||| ||| | ||||||||||||||||| || || || ||||||||||||||
Sbjct: 350 tgccatccttcgtgctttaactcaagatgttgatgaattctatggactctgtgatccaga 409
Query: 126 aaaggataacttgtgtctttatggacatccaaatgaaagctgggaagtaacgctgccagc 185
||||| ||| |||| || |||||||||||||||||| ||||| || || ||||||||
Sbjct: 410 taaggagaacctgtgcctctatggacatccaaatgaatcatgggaggtgactctgccagc 469
Query: 186 ggaggaagttccgccagagctccctgagccagctcttggaatcaattttgctagagatgg 245
||||| ||||| || ||||| || ||||| ||||| ||||||||||||||||| |||||
Sbjct: 470 agaggaggttccacctgagcttccggagcctgctctcggaatcaattttgctagggatgg 529
Query: 246 catgaatcgcagggattggctttctctggttgctgtgcacagtgattcgtggttgctttc 305
||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 530 aatgaaccgtagggactggctttctctggttgccgtgcacagtgattcgtggttgctttc 589
Query: 306 tgtggccttttatcttggagctcgtcttaaccgcaatgaaaggaaacgtttgttcagtct 365
|||||| ||||||||||||||||||||||||||||||||||||||||| | || || |
Sbjct: 590 tgtggcattttatcttggagctcgtcttaaccgcaatgaaaggaaacggctatttagctt 649
Query: 366 gatcaatgactttcccaccgtgtttgaagttgtgactgacaggaaaccagctaaagacaa 425
||||||||| |||||||||| ||||||||||| ||||| ||||| ||| ||||||||
Sbjct: 650 gatcaatgatcttcccaccgtttttgaagttgtcactgagaggaagccaataaaagacaa 709
Query: 426 gccagccacggatagtggaagcaaatccagaggaagcaccaagagatctagtgatgggca 485
||| | || |||||||||||||| | || ||||||||||||| |||||||||||
Sbjct: 710 gcccactgtagacagtggaagcaaatctcggggtggcaccaagagatcaagtgatgggca 769
Query: 486 agttaa---gagcaaccctaagtttgcagaggagggttatgaggaggaggatgatgagca 542
|||||| |||||||| ||||| ||||| || |||||||||||||| || ||||||||
Sbjct: 770 agttaaaagcagcaacccaaagttcgcagatgaaggttatgaggaggatgaagatgagca 829
Query: 543 cagtgaaaccctttgcgggagctgcggtggaaactacaatgccgacgagttttggattgg 602
|| |||||||| || ||||||||||| ||||| |||||||| || || || ||||||||
Sbjct: 830 tagcgaaaccctctgtgggagctgcggcggaaattacaatgcggatgaattctggattgg 889
Query: 603 gtgcgacatatgcgagaggtggtaccatgggaagtgtgtgaagattacacctgcaaaggc 662
|| || | || ||||||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 890 atgtgatgtgtgtgagaggtggtaccatggaaaatgtgtgaagattactcctgcaaaggc 949
Query: 663 tgagagcataaagcaatataagtgcccatcatgcagcatgaggaggggcaggccctag 720
||||||||||||||| || || ||||||||||||||||||| | || |||||||||||
Sbjct: 950 tgagagcataaagcagtacaaatgcccatcatgcagcatgaagcggagcaggccctag 1007
>gnl|LJGI|BW594416 homologue to UniRef100_A0FK64 Cluster: PHD4; n=1; Medicago
truncatula|Rep: PHD4 - Medicago truncatula (Barrel
medic), partial (54%)
Length = 485
Score = 335 bits (169), Expect = 2e-91
Identities = 346/405 (85%)
Strand = Plus / Plus
Query: 6 aatggcttccagtccccgcaccgtcgaagagatcttcaaggatttcagtgctagaaaaac 65
|||||| ||||||||||||||||| ||||||||||||||||| | || ||| | | |
Sbjct: 69 aatggcgtccagtccccgcaccgttgaagagatcttcaaggactacaccgctcgcagaga 128
Query: 66 cgctattgttcgcgctctcactcaagatgttgatgatttttacgggctctgtgatccaga 125
|| || |||| ||| | ||||||||||||||||| || || || ||||||||||||||
Sbjct: 129 tgccatccttcgtgctttaactcaagatgttgatgaattctatggactctgtgatccaga 188
Query: 126 aaaggataacttgtgtctttatggacatccaaatgaaagctgggaagtaacgctgccagc 185
||||| ||| |||| || |||||||||||||||||| ||||| || || ||||||||
Sbjct: 189 taaggagaacctgtgcctctatggacatccaaatgaatcatgggaggtgactctgccagc 248
Query: 186 ggaggaagttccgccagagctccctgagccagctcttggaatcaattttgctagagatgg 245
||||| ||||| || ||||| || ||||| ||||| ||||||||||||||||| |||||
Sbjct: 249 agaggaggttccacctgagcttccggagcctgctctcggaatcaattttgctagggatgg 308
Query: 246 catgaatcgcagggattggctttctctggttgctgtgcacagtgattcgtggttgctttc 305
||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 309 aatgaaccgtagggactggctttctctggttgccgtgcacagtgattcgtggttgctttc 368
Query: 306 tgtggccttttatcttggagctcgtcttaaccgcaatgaaaggaaacgtttgttcagtct 365
|||||| ||||||||||||||||||||||||||||||||||||||||| | || || |
Sbjct: 369 tgtggcattttatcttggagctcgtcttaaccgcaatgaaaggaaacggctatttagctt 428
Query: 366 gatcaatgactttcccaccgtgtttgaagttgtgactgacaggaa 410
||||||||| |||||||||| ||||||||||| ||||| |||||
Sbjct: 429 gatcaatgatcttcccaccgtttttgaagttgtcactgagaggaa 473
>gnl|LJGI|AW719518 homologue to UniRef100_A7P4R4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 391
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 589 gagttttggattgggtgcgacatatgcgagaggtggtaccatgggaagtgtgtgaagatt 648
|||||||||||| | || ||||| ||||||| ||||| |||||| |||||||||||||||
Sbjct: 289 gagttttggatttgctgtgacatctgcgagaagtggttccatggaaagtgtgtgaagatt 348
Query: 649 acacctgcaaaggctgag 666
|| ||||||| |||||||
Sbjct: 349 acccctgcaagggctgag 366
>gnl|LJGI|TC57893 homologue to UniRef100_A7P4R4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1274
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 589 gagttttggattgggtgcgacatatgcgagaggtggtaccatgggaagtgtgtgaagatt 648
|||||||||||| | || ||||| ||||||| ||||| |||||| |||||||||||||||
Sbjct: 728 gagttttggatttgctgtgacatctgcgagaagtggttccatggaaagtgtgtgaagatt 787
Query: 649 acacctgcaaaggctgag 666
|| ||||||| |||||||
Sbjct: 788 acccctgcaagggctgag 805
>gnl|LJGI|TC60545 similar to UniRef100_Q06A77 Cluster: PHD3; n=1; Glycine max|Rep:
PHD3 - Glycine max (Soybean), complete
Length = 1244
Score = 75.8 bits (38), Expect = 3e-13
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 589 gagttttggattgggtgcgacatatgcgagaggtggtaccatgggaagtgtgtgaagatt 648
||||| |||||| | || ||||| || |||| ||||| |||||| ||||||||||||||
Sbjct: 772 gagttctggatttgctgtgacatctgtgagaagtggttccatggcaagtgtgtgaagatc 831
Query: 649 acacctgcaaaggctgagagcataaagcaatataagtgcccatcatgcag 698
|| ||||| | ||| ||| ||| |||||||| |||||||||||||||||
Sbjct: 832 acccctgctagggcagagcacatcaagcaatacaagtgcccatcatgcag 881
>gnl|LJGI|AV765272 similar to UniRef100_A0FK64 Cluster: PHD4; n=1; Medicago
truncatula|Rep: PHD4 - Medicago truncatula (Barrel
medic), partial (18%)
Length = 315
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 627 ccatgggaagtgtgtgaagattacacctgcaaaggctgagagcataaagca 677
|||||| || |||||||||||||| || |||||||||||||||||||||||
Sbjct: 277 ccatggaaaatgtgtgaagattactcccgcaaaggctgagagcataaagca 227
>gnl|LJGI|TC64997 similar to UniRef100_A7P4R4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 1188
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 604 tgcgacatatgcgagaggtggtaccatgggaagtgtgtgaagattacacctgcaaaggct 663
|||||||| || |||| ||||| |||||| || |||||||||||||| ||||||||||||
Sbjct: 791 tgcgacatctgtgagaagtggttccatggaaaatgtgtgaagattacccctgcaaaggct 850
>gnl|LJGI|TC60251 homologue to UniRef100_Q06A73 Cluster: PHD1; n=1; Glycine max|Rep:
PHD1 - Glycine max (Soybean), partial (97%)
Length = 1284
Score = 61.9 bits (31), Expect = 5e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 631 gggaagtgtgtgaagattacacctgcaaaggctgagagcataaagcaatataagtgccca 690
||||||||||||||||| || ||||| | ||||||| || |||||||| |||||||||
Sbjct: 904 gggaagtgtgtgaagatcactcctgctagggctgagcatatcaagcaatacaagtgccca 963
Query: 691 tcatgca 697
|||||||
Sbjct: 964 tcatgca 970
>gnl|LJGI|TC77333 homologue to UniRef100_Q06A73 Cluster: PHD1; n=1; Glycine max|Rep:
PHD1 - Glycine max (Soybean), partial (35%)
Length = 741
Score = 54.0 bits (27), Expect = 1e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 631 gggaagtgtgtgaagattacacctgcaaaggctgagagcataaagcaatataagtgccca 690
||||||||||||||||| || ||||| | ||||||| || |||||||| ||||||||
Sbjct: 360 gggaagtgtgtgaagatcactcctgctagggctgagcatatcaagcaataccagtgccca 419
Query: 691 tcatgca 697
|||||||
Sbjct: 420 tcatgca 426