Miyakogusa Predicted Gene
- Lj1g3v2325590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2325590.1 Non Chatacterized Hit- tr|A8B830|A8B830_GIAIC
Putative uncharacterized protein OS=Giardia
intestinal,23.78,7e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; LMBR1,LMBR1-like membrane protein; coiled,CUFF.28891.1
(1533 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58455 homologue to UniRef100_A7PP47 Cluster: Chromoso... 1283 0.0
gnl|LJGI|TC65421 homologue to UniRef100_A7PP47 Cluster: Chromoso... 884 0.0
gnl|LJGI|TC67790 homologue to UniRef100_A7PP47 Cluster: Chromoso... 728 0.0
gnl|LJGI|AW719681 homologue to UniRef100_A7PP47 Cluster: Chromos... 408 e-113
gnl|LJGI|TC70932 homologue to UniRef100_A7PP47 Cluster: Chromoso... 329 3e-89
gnl|LJGI|CB828647 homologue to UniRef100_A7PP47 Cluster: Chromos... 94 3e-18
gnl|LJGI|TC80824 58 2e-07
>gnl|LJGI|TC58455 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 862
Score = 1283 bits (647), Expect = 0.0
Identities = 708/727 (97%), Gaps = 1/727 (0%)
Strand = Plus / Plus
Query: 1 atgggcgatttcaatctcgcactggtgatcgttgcgatcgtggtgtgcgtgatcgtgttc 60
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 136 atgggcgatttcaatctcgccctggtgattgttgcgatcgtggtgtgcgtgatcgtgttc 195
Query: 61 ctcttcaatgtctacctgctcgtgaactatcagcacccagatgatgtgaaccaggcttac 120
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 196 ctcttcaatgtctacctgctcgtgaactaccagcaccctgatgatgtgaaccaggcttac 255
Query: 121 tttcccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttccccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 315
Query: 181 ccggcggatgtcgctaaccgtcaggcctgtcgccacgcgatttacaacggcgcgtgtaac 240
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 316 ccggcggatgtcgctaaccggcaagcctgtcgccacgcgatttacaacggcgcgtgtaat 375
Query: 241 ctcacgctcccaatgaaggacctctggcttgccatctacattcttgacgcggttctcgtc 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 376 ctcacgctcccaatgaaggacctctggcttgccatctacattctcgacgcggttctcgtc 435
Query: 301 ttcttcgtcatcccctttgccatgttcttctatgaaggagaccaggataagagtgttggt 360
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 436 ttctttgtcatccccttcgccatgttcttctatgaaggagaccaggacaagagtgttggt 495
Query: 361 aagaggattaagagcgc-tctgttgtgggtggtgaccactgctatcgtctgcgctcttgt 419
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 496 aagaggattaagagcgcgtctgttgtggatggtgaccactgctatcgtctgcgctcttgt 555
Query: 420 tctgggtattttatacgggcttgttggtaaggtggattttaccgtaaggcatctctcttc 479
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cctgggtactttatacgggcttgttggtaaggtggattttaccgtaaggcatctctcttc 615
Query: 480 ttccacaagctcatttcctagctcatggaacttcaataatggtcaaccgtgtattggaag 539
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 616 ttccacaagctcatttcctagctcatggaacttcaataatggtcaacagtgtattggaag 675
Query: 540 tggcaccaagcagtgttctgcatactctgctagtccttcatcagagaaaacctggaccat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tggcaccaagcagtgttctgcatactctgctagtccttcatcagagaaaacctggaccat 735
Query: 600 gagagctacctttccagaatatgttgttgctcttgctactattgttggatctgtgctttt 659
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 736 gagagctacctttccagaatatgttgttgctctcgcaactattgttggatctgtgctttt 795
Query: 660 tgctatatttggtggtgttggtatcgcttgtcttccattgggacttatattttcatttat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tgctatatttggtggtgttggtatcgcttgtcttccattgggacttatattttcatttat 855
Query: 720 tcggcgt 726
|||||||
Sbjct: 856 tcggcgt 862
>gnl|LJGI|TC65421 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 765
Score = 884 bits (446), Expect = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus
Query: 1 atgggcgatttcaatctcgcactggtgatcgttgcgatcgtggtgtgcgtgatcgtgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgggcgatttcaatctcgcactggtgatcgttgcgatcgtggtgtgcgtgatcgtgttc 379
Query: 61 ctcttcaatgtctacctgctcgtgaactatcagcacccagatgatgtgaaccaggcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcttcaatgtctacctgctcgtgaactatcagcacccagatgatgtgaaccaggcttac 439
Query: 121 tttcccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttcccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 499
Query: 181 ccggcggatgtcgctaaccgtcaggcctgtcgccacgcgatttacaacggcgcgtgtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccggcggatgtcgctaaccgtcaggcctgtcgccacgcgatttacaacggcgcgtgtaac 559
Query: 241 ctcacgctcccaatgaaggacctctggcttgccatctacattcttgacgcggttctcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctcacgctcccaatgaaggacctctggcttgccatctacattcttgacgcggttctcgtc 619
Query: 301 ttcttcgtcatcccctttgccatgttcttctatgaaggagaccaggataagagtgttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcttcgtcatcccctttgccatgttcttctatgaaggagaccaggataagagtgttggt 679
Query: 361 aagaggattaagagcgctctgttgtgggtggtgaccactgctatcgtctgcgctcttgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagaggattaagagcgctctgttgtgggtggtgaccactgctatcgtctgcgctcttgtt 739
Query: 421 ctgggtattttatacgggcttgttgg 446
||||||||||||||||||||||||||
Sbjct: 740 ctgggtattttatacgggcttgttgg 765
>gnl|LJGI|TC67790 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 716
Score = 728 bits (367), Expect = 0.0
Identities = 370/371 (99%)
Strand = Plus / Plus
Query: 1163 accttctccttgctgtgattgctggtgccatgatgcttgggctgagactagtcttcatta 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accttctccttgctgtgattgctggtgccatgatgcttgggctgagactagtcttcatta 60
Query: 1223 ctatacatcccatgaagtggggtgggactctcatgaactcttttctgttcaacgtggggc 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatacatcccatgaagtggggtgggactctcatgaactcttttctgttcaacgtggggc 120
Query: 1283 ttatccttctttgttccattagtgtaatccagttctgctccacggcatttgcctactatg 1342
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 ttatccttctttgttccattagtgtaatccagttctgctccacggcacttgcctactatg 180
Query: 1343 ctcaagcaactgctgcacaggaaatatttggccacaccttggagtctcttcgtggaatta 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcaagcaactgctgcacaggaaatatttggccacaccttggagtctcttcgtggaatta 240
Query: 1403 aatatttgtacaagtacaacgtatttcagatcgcatttgttgttttggctggattgactt 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatatttgtacaagtacaacgtatttcagatcgcatttgttgttttggctggattgactt 300
Query: 1463 ttgtatattatgctgcctttggatggagaagaaagaagcctagtggcaggttccaattgt 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgtatattatgctgcctttggatggagaagaaagaagcctagtggcaggttccaattgt 360
Query: 1523 ctacatgaggt 1533
|||||||||||
Sbjct: 361 ctacatgaggt 371
>gnl|LJGI|AW719681 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 408
Score = 408 bits (206), Expect = e-113
Identities = 227/234 (97%)
Strand = Plus / Plus
Query: 1 atgggcgatttcaatctcgcactggtgatcgttgcgatcgtggtgtgcgtgatcgtgttc 60
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 175 atgggcgatttcaatctcgccctggtgattgttgcgatcgtggtgtgcgtgatcgtgttc 234
Query: 61 ctcttcaatgtctacctgctcgtgaactatcagcacccagatgatgtgaaccaggcttac 120
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 235 ctcttcaatgtctacctgctcgtgaactaccagcaccctgatgatgtgaaccaggcttac 294
Query: 121 tttcccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttccccaaattcgtcgtcgttttgggactctccgtcgccgctatttccattctcatgctt 354
Query: 181 ccggcggatgtcgctaaccgtcaggcctgtcgccacgcgatttacaacggcgcg 234
|||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 355 ccggcggatgtcgctaaccggcaagcctgtcgccacgcgatttacaacggcgcg 408
>gnl|LJGI|TC70932 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 614
Score = 329 bits (166), Expect = 3e-89
Identities = 199/210 (94%)
Strand = Plus / Plus
Query: 1324 acggcatttgcctactatgctcaagcaactgctgcacaggaaatatttggccacaccttg 1383
||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1 acggcatttgcttactatgcccaagcaactgctgcacaggaaatttttggccacactttg 60
Query: 1384 gagtctcttcgtggaattaaatatttgtacaagtacaacgtatttcagatcgcatttgtt 1443
||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 gagtcgctccgtggaattaaatatttgtacaagtacaatgtatttcagatcgcatttgtt 120
Query: 1444 gttttggctggattgacttttgtatattatgctgcctttggatggagaagaaagaagcct 1503
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttttggctggattgacgtttgtgtattatgctgcctttggatggagaagaaagaagcct 180
Query: 1504 agtggcaggttccaattgtctacatgaggt 1533
|||||||||||||| ||||||||||||||
Sbjct: 181 agtggcaggttccagctgtctacatgaggt 210
>gnl|LJGI|CB828647 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (2%)
Length = 527
Score = 93.7 bits (47), Expect = 3e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 1416 gtacaacgtatttcagatcgcatttgttgttttggctggattgactt 1462
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtacaacgtatttcagatcgcatttgttgttttggctggattgactt 527
>gnl|LJGI|TC80824
Length = 484
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1487 ggagaagaaagaagcctagtggcaggttccaattgtctacatgag 1531
||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 1 ggagaagaaagaagcctagtgccagctccccattgtctacatgag 45