Miyakogusa Predicted Gene
- Lj1g3v2315440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2315440.1 tr|C1MI02|C1MI02_MICPC Mitochondrial carrier
family (Fragment) OS=Micromonas pusilla (strain
CCMP154,27.4,1e-17,Mitochondrial carrier,Mitochondrial carrier domain;
coiled-coil,NULL; seg,NULL; Mito_carr,Mitochondr,CUFF.28922.1
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP039065 similar to UniRef100_A7PP43 Cluster: Chromosom... 1090 0.0
gnl|LJGI|FS343800 similar to UniRef100_Q9M024 Cluster: Thylakoid... 115 6e-25
>gnl|LJGI|BP039065 similar to UniRef100_A7PP43 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 564
Score = 1090 bits (550), Expect = 0.0
Identities = 553/554 (99%)
Strand = Plus / Plus
Query: 6 cgccacagaggagagggccttactctcgtggcgccaaatcccgcacctccaatgcggtgt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cgccacagaggagagggccttactctcgtggcgccaaatcccgcacctccaatgcggtgt 70
Query: 66 cgttacaccaagtacaacccgccacgcgctccggcagagcgccaccgtcagtttcgcggc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cgttacaccaagtacaacccgccacgcgctccggcagagcgccaccgtcagtttcgcggc 130
Query: 126 ctccgccggtgactgcaggttcgcctgcttctcggtggcggaaacgaaactgcatccgga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctccgccggtgactgcaggttcgcctgcttctcggtggcggaaacgaaactgcatccgga 190
Query: 186 ccatttcgttccgacactgtctcagctccttaagcaccctctggccatcttggcgttcgt 245
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ccattgcgttccgacactgtctcagctccttaagcaccctctggccatcttggcgttcgt 250
Query: 246 gcccagagatgcttccctcttctctgccggagccatcgccggtgccgccgcaaagaccgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcccagagatgcttccctcttctctgccggagccatcgccggtgccgccgcaaagaccgt 310
Query: 306 cacagcgccgctcgaccgtatcaagctccttatgcagactcatggtgtgcgggttgggca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cacagcgccgctcgaccgtatcaagctccttatgcagactcatggtgtgcgggttgggca 370
Query: 366 agatagtgctaagaaggcggcaataggtttcgtggaggccataacagttataggaaagga 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agatagtgctaagaaggcggcaataggtttcgtggaggccataacagttataggaaagga 430
Query: 426 agaagggattagaggttactggaaggggaacctccctcaggttatccgggttatacctta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agaagggattagaggttactggaaggggaacctccctcaggttatccgggttatacctta 490
Query: 486 tagcgcagttcagctttttgcttatgaaatttataagaaaatattcaggggacagaatgg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tagcgcagttcagctttttgcttatgaaatttataagaaaatattcaggggacagaatgg 550
Query: 546 cgagctctctgttg 559
||||||||||||||
Sbjct: 551 cgagctctctgttg 564
>gnl|LJGI|FS343800 similar to UniRef100_Q9M024 Cluster: Thylakoid ADP,ATP carrier
protein, chloroplast precursor; n=1; Arabidopsis
thaliana|Rep: Thylakoid ADP,ATP carrier protein,
chloroplast precursor - Arabidopsis thaliana (Mouse-ear
cress), partial (27%)
Length = 526
Score = 115 bits (58), Expect = 6e-25
Identities = 156/188 (82%), Gaps = 3/188 (1%)
Strand = Plus / Plus
Query: 301 accgtcacagcgccgctcgaccgtatcaagctccttatgcagactcatggtgtgcgggtt 360
|||||||| |||||||| || || ||||| | || ||||||||||| || ||||| |||
Sbjct: 336 accgtcaccgcgccgcttgatcgcatcaaaattctcatgcagactcacggggtgcgagtt 395
Query: 361 gggcaagatagtgctaagaaggcggcaataggtttcgtggaggccataacagttatagga 420
|||||||| ||||| |||| || || |||||||| ||||||||| | | |||||
Sbjct: 396 gggcaagaaagtgccaagagagct---attggtttcgttgaggccatatcggcaataggg 452
Query: 421 aaggaagaagggattagaggttactggaaggggaacctccctcaggttatccgggttata 480
||||||||||| |||| ||||||||||||||| |||||||| ||||| || |||||||||
Sbjct: 453 aaggaagaaggcattaaaggttactggaagggcaacctcccacaggtgattcgggttata 512
Query: 481 ccttatag 488
||||||||
Sbjct: 513 ccttatag 520