Miyakogusa Predicted Gene
- Lj1g3v2313120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2313120.1 Non Chatacterized Hit- tr|I3T9K0|I3T9K0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.32,0,HIGHMOBLTY12,NULL; no description,High mobility group,
superfamily; HMG_box,High mobility group,
sup,NODE_18835_length_687_cov_614.995605.path2.1
(444 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59634 similar to UniRef100_Q1EMR5 Cluster: HMG-protei... 880 0.0
gnl|LJGI|TC68874 weakly similar to UniRef100_Q1EMR5 Cluster: HMG... 262 2e-69
>gnl|LJGI|TC59634 similar to UniRef100_Q1EMR5 Cluster: HMG-protein; n=1; Plantago
major|Rep: HMG-protein - Plantago major (Common
plantain), partial (63%)
Length = 944
Score = 880 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Plus
Query: 1 atgacaaagggaaagaaagctggaaagacttcaaaggaagtattgaaaccagttgatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 atgacaaagggaaagaaagctggaaagacttcaaaggaagtattgaaaccagttgatgac 152
Query: 61 cgaaaggtaggaaagcgaaaggcggctgttaaacccgataagggtactgcagggaaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cgaaaggtaggaaagcgaaaggcggctgttaaacccgataagggtactgcagggaaggca 212
Query: 121 aagaaggccaagaaagatcccaacaaaccaaaaagaccgcccagcgctttctttgtgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aagaaggccaagaaagatcccaacaaaccaaaaagaccgcccagcgctttctttgtgttc 272
Query: 181 cttgaggatttcagaaagacttttaaggctgaaaatcctaatgtaaagggtgtatccgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cttgaggatttcagaaagacttttaaggctgaaaatcctaatgtaaagggtgtatccgct 332
Query: 241 gttgggaaagctggaggagaaaaatggaaatccttgactaaggctgagaaagctccatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gttgggaaagctggaggagaaaaatggaaatccttgactaaggctgagaaagctccatat 392
Query: 301 gaagctaaggctgcaaaaaggaaagctgagtatgaaaaacttattaatgcttataataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaagctaaggctgcaaaaaggaaagctgagtatgaaaaacttattaatgcttataataat 452
Query: 361 aaacaggcaagtacagcggatgatgtagacgaggaatcggacaagtccaaatctgaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaacaggcaagtacagcggatgatgtagacgaggaatcggacaagtccaaatctgaaata 512
Query: 421 aatgatgaagaggacgaagccagt 444
||||||||||||||||||||||||
Sbjct: 513 aatgatgaagaggacgaagccagt 536
>gnl|LJGI|TC68874 weakly similar to UniRef100_Q1EMR5 Cluster: HMG-protein; n=1;
Plantago major|Rep: HMG-protein - Plantago major (Common
plantain), partial (19%)
Length = 602
Score = 262 bits (132), Expect = 2e-69
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 313 gcaaaaaggaaagctgagtatgaaaaacttattaatgcttataataataaacaggcaagt 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaaaaaggaaagctgagtatgaaaaacttattaatgcttataataataaacaggcaagt 60
Query: 373 acagcggatgatgtagacgaggaatcggacaagtccaaatctgaaataaatgatgaagag 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagcggatgatgtagacgaggaatcggacaagtccaaatctgaaataaatgatgaagag 120
Query: 433 gacgaagccagt 444
||||||||||||
Sbjct: 121 gacgaagccagt 132