Miyakogusa Predicted Gene

Lj1g3v2312950.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2312950.1 Non Chatacterized Hit- tr|I1KKC4|I1KKC4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,79.34,0,PROTEIN_KINASE_ATP,Protein kinase, ATP binding site;
PROTEIN_KINASE_ST,Serine/threonine-protein kina,CUFF.28851.1
         (3135 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO013158 similar to UniRef100_A7P3T9 Cluster: Chromosom...    88   4e-16
gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Ri...    56   1e-06

>gnl|LJGI|GO013158 similar to UniRef100_A7P3T9 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 453

 Score = 87.7 bits (44), Expect = 4e-16
 Identities = 59/63 (93%), Gaps = 2/63 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggttgaaggggggagaaatcgatggtggggttctgactcagaaaatctcaacaccaacgc 64
           ||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||||
Sbjct: 122 ggttgaaggggggagaaatcgatggtggggttctggcccag--aatctcaacaccaacgc 65

              
Query: 65  ttc 67
           |||
Sbjct: 64  ttc 62


>gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Rich Repeat family
            protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
            Leucine Rich Repeat family protein, expressed - Oryza
            sativa subsp. japonica (Rice), partial (11%)
          Length = 502

 Score = 56.0 bits (28), Expect = 1e-06
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                        
Query: 2534 ttcattgtgatataaagccaagcaatgt 2561
            ||||||||||||||||||||||||||||
Sbjct: 473  ttcattgtgatataaagccaagcaatgt 500