Miyakogusa Predicted Gene

Lj1g3v2311890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2311890.1 tr|G7KRB0|G7KRB0_MEDTR Lactosylceramide
4-alpha-galactosyltransferase OS=Medicago truncatula
GN=MTR_,66.28,0,LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE (ALPHA-
1,4-GALACTOSYLTRANSFERASE),NULL; Gb3_synth,Al,CUFF.28844.1
         (1314 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73322                                                       90   4e-17

>gnl|LJGI|TC73322 
          Length = 568

 Score = 89.7 bits (45), Expect = 4e-17
 Identities = 120/141 (85%), Gaps = 3/141 (2%)
 Strand = Plus / Plus

                                                                        
Query: 976  gaatttgcattgacttttgatggaaacaaatgggggcataatggtccttacatggtttca 1035
            ||||||||||||| ||| || ||||||||||||||  |||||||||| ||| || |||| 
Sbjct: 12   gaatttgcattgaattt-gagggaaacaaatggggt-ataatggtccctacctgttttct 69

                                                                        
Query: 1036 agagtggttgcaaaacttgggaaaagcccaggtttcaaatttacaatcttgccccctgta 1095
            |||| ||||| |||||||||||| || |||| |||||| |||| ||||||| ||||| ||
Sbjct: 70   agagcggttggaaaacttgggaataggccagatttcaactttaaaatcttg-cccctata 128

                                 
Query: 1096 gccttttatcctgtagattgg 1116
             |||||||||| | |||||||
Sbjct: 129  tccttttatccagaagattgg 149



 Score = 81.8 bits (41), Expect = 1e-14
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1254 agaaggaagtgtcatagcaagacttgtatcagaacactgtgtcatttgcaactctttata 1313
            ||||||||||||| ||||||||||||||| ||| || |||||||||||||||||| ||||
Sbjct: 283  agaaggaagtgtcctagcaagacttgtattagatcattgtgtcatttgcaactctctata 342

             
Query: 1314 g 1314
            |
Sbjct: 343  g 343