Miyakogusa Predicted Gene

Lj1g3v2300720.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2300720.2 tr|A9RW32|A9RW32_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,50.65,0.00000000000005, ,CUFF.28837.2
         (276 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64085 homologue to UniRef100_A2Q1R4 Cluster: HEAT; n=...   412   e-115
gnl|LJGI|BP053710 similar to UniRef100_A2Q1R4 Cluster: HEAT; n=1...   188   1e-47

>gnl|LJGI|TC64085 homologue to UniRef100_A2Q1R4 Cluster: HEAT; n=1; Medicago
           truncatula|Rep: HEAT - Medicago truncatula (Barrel
           medic), partial (15%)
          Length = 737

 Score =  412 bits (208), Expect = e-115
 Identities = 229/236 (97%)
 Strand = Plus / Plus

                                                                       
Query: 14  tagtgaaaagctacttgccaatcaaagatgctcttgttcgtcctggtattgatggtcttc 73
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 399 tagtgaaaagctacttgccaatcaaagatgctcttgttcgtcctggtattgatgatcttc 458

                                                                       
Query: 74  tggatatcctgcgaaacatgctatcatatggtgaaatatcaaaggacctaaagtcaagct 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 459 tggatatcctgcgaaacatgctatcatatggtgaaatatcaaaggacctaaagtccagct 518

                                                                       
Query: 134 cagttgataaggcccacttgaggcttacttctgcaatggcaattcttcgtttgtcaaggc 193
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 519 cagttgataaggcccacttgaggcttacttctgcaaaggcaattcttcgtttgtcaaggc 578

                                                                   
Query: 194 tctgggatcataagatacctgctgatattttccacttaactttaaggacatcagag 249
           | ||||||||||||||||||||||| ||||||||||||||||||||| || |||||
Sbjct: 579 tttgggatcataagatacctgctgacattttccacttaactttaagggcaacagag 634


>gnl|LJGI|BP053710 similar to UniRef100_A2Q1R4 Cluster: HEAT; n=1; Medicago
           truncatula|Rep: HEAT - Medicago truncatula (Barrel
           medic), partial (9%)
          Length = 501

 Score =  188 bits (95), Expect = 1e-47
 Identities = 182/211 (86%)
 Strand = Plus / Plus

                                                                       
Query: 35  tcaaagatgctcttgttcgtcctggtattgatggtcttctggatatcctgcgaaacatgc 94
           |||||||||||| | ||||||||| ||||||  ||||||| ||||| ||  | |||||||
Sbjct: 142 tcaaagatgctcatcttcgtcctgatattgacagtcttctagatatacttaggaacatgc 201

                                                                       
Query: 95  tatcatatggtgaaatatcaaaggacctaaagtcaagctcagttgataaggcccacttga 154
           |||| ||||| ||||||||||| ||  || ||||||| ||| ||||||||||||| ||||
Sbjct: 202 tatcttatggggaaatatcaaaagaaatacagtcaagttcaattgataaggcccatttga 261

                                                                       
Query: 155 ggcttacttctgcaatggcaattcttcgtttgtcaaggctctgggatcataagatacctg 214
           ||||| |||| |||| |||| |||||||| |||||||||| |||||||| ||||||||||
Sbjct: 262 ggcttgcttccgcaaaggcagttcttcgtctgtcaaggctttgggatcagaagatacctg 321

                                          
Query: 215 ctgatattttccacttaactttaaggacatc 245
            ||||||||| ||||||||||||||| ||||
Sbjct: 322 ttgatatttttcacttaactttaagggcatc 352