Miyakogusa Predicted Gene
- Lj1g3v2297620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2297620.1 Non Chatacterized Hit- tr|E1ZP61|E1ZP61_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.26,4e-17,SUBFAMILY NOT NAMED,NULL; SYNTAXIN-18,NULL;
coiled-coil,NULL; Syntaxin-18_N,SNARE-complex protein Sy,CUFF.28865.1
(597 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67968 similar to UniRef100_A7PID6 Cluster: Chromosome... 1035 0.0
gnl|LJGI|GO023125 similar to UniRef100_A7PID6 Cluster: Chromosom... 922 0.0
gnl|LJGI|TC66895 similar to UniRef100_A7PID6 Cluster: Chromosome... 533 e-151
gnl|LJGI|TC75419 similar to UniRef100_A7PID6 Cluster: Chromosome... 96 3e-19
gnl|LJGI|BP061993 homologue to UniRef100_A7PID6 Cluster: Chromos... 92 5e-18
>gnl|LJGI|TC67968 similar to UniRef100_A7PID6 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1204
Score = 1035 bits (522), Expect = 0.0
Identities = 586/610 (96%), Gaps = 13/610 (2%)
Strand = Plus / Plus
Query: 1 atggcaaaagcgagagacagaaccgaagatttcaaagatgcagtgcgccagagtgctcgc 60
||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 104 atggcgaaagcgagagatagaaccgaagatttcaaagatgcagtgcgccacagtgctcgc 163
Query: 61 tctctcggctacgatgaggctaagttggcttcaattttggcatctttcatcattcataaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 164 tctctcggctacgatgaggctaagttggcttcaattttggcatctttcattattcataaa 223
Query: 121 cctccgcaaaggtctccattttacaaagctgcattaaagacgcttgagagtattggagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 cctccgcaaaggtctccattttacaaagctgcattaaagacgcttgagagtattggagaa 283
Query: 181 ttggaacagtttctgttgaagcatagaaaggactatacagatcttcaccgcacaactgaa 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttggaacagtttttgttgaagcatagaaaggactatacagatcttcaccgcacaactgaa 343
Query: 241 caagagagagatagcattgagcaagaagtcagtgcttttattaaaacatgccaagaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 caagagagagatagcattgagcaagaagtcagtgcttttattaaaacatgccaagaacaa 403
Query: 301 atcgatgttctcaagaatagtataaataatgaagaggaaacttcaaaaggttggcttggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atcgatgttctcaagaatagtataaataatgaagaggaaacttcaaaaggttggcttggc 463
Query: 361 attgcgaccgcaaaggctaatgccgacaccattgcccacaaacatggagtggttctaatt 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 attgcgactgcaaaggctaatgccgacaccattgcccacaaacatggagtggttctaatt 523
Query: 421 ttaagtgagagactccatccagttacagcacagtttgatcagctcagagctgtacgcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttaagtgagagactccatccagttacagcacagtttgatcagctcagagctgtacgcttc 583
Query: 481 caggatgctattaatagagcgacaccacgaagaaaacttagtcgtgtgacccggaaagat 540
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||
Sbjct: 584 caggatgctattaatagagcaacaccacgaagaaaacttaatcgtgtgacccggaaaaat 643
Query: 541 tctactgaa-------------gtgatatggagctcagagaacctgatgagttacgcagc 587
|||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 644 actactgaaacctctgaatcaggtgatatggagctcagagaacctgatgagttacgcagt 703
Query: 588 gagcctttaa 597
||||||||||
Sbjct: 704 gagcctttaa 713
>gnl|LJGI|GO023125 similar to UniRef100_A7PID6 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 590
Score = 922 bits (465), Expect = 0.0
Identities = 480/485 (98%)
Strand = Plus / Plus
Query: 1 atggcaaaagcgagagacagaaccgaagatttcaaagatgcagtgcgccagagtgctcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atggcaaaagcgagagacagaaccgaagatttcaaagatgcagtgcgccagagtgctcgc 165
Query: 61 tctctcggctacgatgaggctaagttggcttcaattttggcatctttcatcattcataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tctctcggctacgatgaggctaagttggcttcaattttggcatctttcatcattcataaa 225
Query: 121 cctccgcaaaggtctccattttacaaagctgcattaaagacgcttgagagtattggagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cctccgcaaaggtctccattttacaaagctgcattaaagacgcttgagagtattggagaa 285
Query: 181 ttggaacagtttctgttgaagcatagaaaggactatacagatcttcaccgcacaactgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttggaacagtttctgttgaagcatagaaaggactatacagatcttcaccgcacaactgaa 345
Query: 241 caagagagagatagcattgagcaagaagtcagtgcttttattaaaacatgccaagaacaa 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 346 caagagagagatagcattgagcaagaagttagtgcttttattaaaacatgccaagaacaa 405
Query: 301 atcgatgttctcaagaatagtataaataatgaagaggaaacttcaaaaggttggcttggc 360
||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 406 atcgatgttcttaagaatagtataaataatgtagaggaaaattcaaaaggttggcttggt 465
Query: 361 attgcgaccgcaaaggctaatgccgacaccattgcccacaaacatggagtggttctaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 attgcgaccgcaaaggctaatgccgacaccattgcccacaaacatggagtggttctaatt 525
Query: 421 ttaagtgagagactccatccagttacagcacagtttgatcagctcagagctgtacgcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttaagtgagagactccatccagttacagcacagtttgatcagctcagagctgtacgcttc 585
Query: 481 cagga 485
|||||
Sbjct: 586 cagga 590
>gnl|LJGI|TC66895 similar to UniRef100_A7PID6 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 580
Score = 533 bits (269), Expect = e-151
Identities = 269/269 (100%)
Strand = Plus / Plus
Query: 1 atggcaaaagcgagagacagaaccgaagatttcaaagatgcagtgcgccagagtgctcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atggcaaaagcgagagacagaaccgaagatttcaaagatgcagtgcgccagagtgctcgc 134
Query: 61 tctctcggctacgatgaggctaagttggcttcaattttggcatctttcatcattcataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tctctcggctacgatgaggctaagttggcttcaattttggcatctttcatcattcataaa 194
Query: 121 cctccgcaaaggtctccattttacaaagctgcattaaagacgcttgagagtattggagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cctccgcaaaggtctccattttacaaagctgcattaaagacgcttgagagtattggagaa 254
Query: 181 ttggaacagtttctgttgaagcatagaaaggactatacagatcttcaccgcacaactgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttggaacagtttctgttgaagcatagaaaggactatacagatcttcaccgcacaactgaa 314
Query: 241 caagagagagatagcattgagcaagaagt 269
|||||||||||||||||||||||||||||
Sbjct: 315 caagagagagatagcattgagcaagaagt 343
>gnl|LJGI|TC75419 similar to UniRef100_A7PID6 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 563
Score = 95.6 bits (48), Expect = 3e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 550 gtgatatggagctcagagaacctgatgagttacgcagcgagcctttaa 597
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtgatatggagctcagagaacctgatgagttacgcagcgagcctttaa 56
>gnl|LJGI|BP061993 homologue to UniRef100_A7PID6 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 350
Score = 91.7 bits (46), Expect = 5e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 552 gatatggagctcagagaacctgatgagttacgcagcgagcctttaa 597
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gatatggagctcagagaacctgatgagttacgcagcgagcctttaa 305