Miyakogusa Predicted Gene
- Lj1g3v2281680.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2281680.2 Non Chatacterized Hit- tr|I1JSV9|I1JSV9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10592
PE,79.94,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PPR_3,,CUFF.29107.2
(2070 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82519 similar to UniRef100_A7QPB3 Cluster: Chromosome... 1735 0.0
gnl|LJGI|FS326074 similar to UniRef100_A7QPB3 Cluster: Chromosom... 605 e-172
gnl|LJGI|TC72438 similar to UniRef100_A7QPB3 Cluster: Chromosome... 210 3e-53
>gnl|LJGI|TC82519 similar to UniRef100_A7QPB3 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1200
Score = 1735 bits (875), Expect = 0.0
Identities = 875/875 (100%)
Strand = Plus / Plus
Query: 1196 atcgcgacaagggggagtggcagaaatcgtttcaggttttgaaggagatgaagagtaatg 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgcgacaagggggagtggcagaaatcgtttcaggttttgaaggagatgaagagtaatg 60
Query: 1256 gggtgcagcctgataggcatttttacaatgtgatgattgatacttttgggaagttcaatt 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtgcagcctgataggcatttttacaatgtgatgattgatacttttgggaagttcaatt 120
Query: 1316 gtcttgatcatgctatggcaacgttcgagcgaatgttgtcggaggagattcgacccgata 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcttgatcatgctatggcaacgttcgagcgaatgttgtcggaggagattcgacccgata 180
Query: 1376 cggttacttggaacacgctgatagattgtcattgtaaggccgggtaccatgatagagcag 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggttacttggaacacgctgatagattgtcattgtaaggccgggtaccatgatagagcag 240
Query: 1436 aggagttgtttcaggaaatgcagcagaagggatactccccttgtgtcttgacttataata 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggagttgtttcaggaaatgcagcagaagggatactccccttgtgtcttgacttataata 300
Query: 1496 tcatgatcaattctatgggggcacaggaaaagtgggaccaagtgagtgatttgttaacta 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcatgatcaattctatgggggcacaggaaaagtgggaccaagtgagtgatttgttaacta 360
Query: 1556 ggatgcagagtcagggattgctgccgaatgcggtaacgtttacaacccttgttgatgtgt 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggatgcagagtcagggattgctgccgaatgcggtaacgtttacaacccttgttgatgtgt 420
Query: 1616 atggaaagtcaggaaggtttaatgacgcgttagagtgcttggaggtcttgaaatctatgg 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggaaagtcaggaaggtttaatgacgcgttagagtgcttggaggtcttgaaatctatgg 480
Query: 1676 gattcaagccaactccaaccatgtataatgccctgatcaatgcatacgcgcaaaggggtc 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattcaagccaactccaaccatgtataatgccctgatcaatgcatacgcgcaaaggggtc 540
Query: 1736 tgtctgatcaagcagtaaacgctttcaggaagatgacagctgagggtctaacacccagtc 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtctgatcaagcagtaaacgctttcaggaagatgacagctgagggtctaacacccagtc 600
Query: 1796 ttttagctctcaattcattgatcaatgcttttggtgaagatagaagggatcctgaggcct 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttttagctctcaattcattgatcaatgcttttggtgaagatagaagggatcctgaggcct 660
Query: 1856 ttgctgtgctgcagtacatgaaagaaaatgacttgcaacctgatgtagttacctatacta 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgctgtgctgcagtacatgaaagaaaatgacttgcaacctgatgtagttacctatacta 720
Query: 1916 cacttatgaaagccttgattcgtgttgacaagttccacaaggtccccgctgtgtatgaag 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cacttatgaaagccttgattcgtgttgacaagttccacaaggtccccgctgtgtatgaag 780
Query: 1976 aaatggtttcgtctggatgcactccagatagaaaggctagagcaatgctgcggtctgctc 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaatggtttcgtctggatgcactccagatagaaaggctagagcaatgctgcggtctgctc 840
Query: 2036 ttagatacatgagacagacacttaaatcataaatt 2070
|||||||||||||||||||||||||||||||||||
Sbjct: 841 ttagatacatgagacagacacttaaatcataaatt 875
>gnl|LJGI|FS326074 similar to UniRef100_A7QPB3 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 764
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 379 atcaccctagcctacgccgtcgtttcatggctccagaagcacaacctctgcttctcctac 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atcaccctagcctacgccgtcgtttcatggctccagaagcacaacctctgcttctcctac 519
Query: 439 gagcttctctactccatcctcatccacgctcttggccgctccgagaagctctacgaagcg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gagcttctctactccatcctcatccacgctcttggccgctccgagaagctctacgaagcg 579
Query: 499 ttcttgctctctcagcggcaaacgctgactcctctcacctacaacgccctcatcgccgcc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ttcttgctctctcagcggcaaacgctgactcctctcacctacaacgccctcatcgccgcc 639
Query: 559 tgtgctcgcaacggcgacctcgagaaagcgctcaacctcatgtcccgcatgcgccgcgac 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tgtgctcgcaacggcgacctcgagaaagcgctcaacctcatgtcccgcatgcgccgcgac 699
Query: 619 ggtttccacccagattttgtcaactacagctccatcatcaggtccctcacgcactccaac 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ggtttccacccagattttgtcaactacagctccatcatcaggtccctcacgcactccaac 759
Query: 679 ataat 683
|||||
Sbjct: 760 ataat 764
Score = 396 bits (200), Expect = e-109
Identities = 200/200 (100%)
Strand = Plus / Plus
Query: 1 atgttggctctgacaccacaactttctactccacccactatcttcccttcttcaacccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atgttggctctgacaccacaactttctactccacccactatcttcccttcttcaacccac 141
Query: 61 cacctcaattactcccccatccgcctccgccaccacctcttccatttccaaccacacgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cacctcaattactcccccatccgcctccgccaccacctcttccatttccaaccacacgcc 201
Query: 121 accgtctcctccgccacacccatcatcgtcgatgacggccctgacgacatcctcgccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 accgtctcctccgccacacccatcatcgtcgatgacggccctgacgacatcctcgccctc 261
Query: 181 caaaaccgccgctacgactt 200
||||||||||||||||||||
Sbjct: 262 caaaaccgccgctacgactt 281
Score = 67.9 bits (34), Expect = 2e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 277 accgagttccacctcgccgagtcctaccgcgccg 310
||||||||||||||||||||||||||||||||||
Sbjct: 358 accgagttccacctcgccgagtcctaccgcgccg 391
>gnl|LJGI|TC72438 similar to UniRef100_A7QPB3 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 501
Score = 210 bits (106), Expect = 3e-53
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1965 tgtgtatgaagaaatggtttcgtctggatgcactccagatagaaaggctagagcaatgct 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tgtgtatgaagaaatggtttcgtctggatgcactccagatagaaaggctagagcaatgct 66
Query: 2025 gcggtctgctcttagatacatgagacagacacttaaatcataaatt 2070
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gcggtctgctcttagatacatgagacagacacttaaatcataaatt 112