Miyakogusa Predicted Gene
- Lj1g3v2280620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2280620.1 Non Chatacterized Hit- tr|I1JSW6|I1JSW6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19428 PE,93.43,0,WD40
repeats,WD40 repeat; WD40,WD40 repeat; no description,WD40/YVTN
repeat-like-containing domain; ,CUFF.28788.1
(1056 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59636 similar to UniRef100_A7NVT6 Cluster: Chromosome... 2077 0.0
gnl|LJGI|DC599333 homologue to UniRef100_Q9LM97 Cluster: F2D10.2... 170 1e-41
gnl|LJGI|AV778322 similar to UniRef100_Q9LMW1 Cluster: F5M15.14;... 163 3e-39
gnl|LJGI|BP042448 similar to UniRef100_A7NVT6 Cluster: Chromosom... 92 8e-18
>gnl|LJGI|TC59636 similar to UniRef100_A7NVT6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1517
Score = 2077 bits (1048), Expect = 0.0
Identities = 1054/1056 (99%)
Strand = Plus / Plus
Query: 1 atgcaagctgcttcatcaggaatcggatacggtccaaaatatcaggctagatgcatatcg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 95 atgcaagctgcttcatcaggaatcggatacggtctaaaatatcaggctagatgcatatcg 154
Query: 61 gatgtaaaagcagacacagatcacactagcttcctcgccggcactctcagcctcaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gatgtaaaagcagacacagatcacactagcttcctcgccggcactctcagcctcaaagaa 214
Query: 121 gaaaatgaggttcatctgattaggctttcgtcgagtggaactgaactgttctgtgaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaaaatgaggttcatctgattaggctttcgtcgagtggaactgaactgttctgtgaggga 274
Query: 181 ttgttttcgcacccgaacgagatctgggaccttgtttcctgcccttttgatcagcgaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttgttttcgcacccgaacgagatctgggaccttgtttcctgcccttttgatcagcgaatc 334
Query: 241 ttctcaaccgtctactctaatggcgaagcgtatggagcagctatatggcagatcccggag 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 335 ttctcaaccgtctactctaatggcgaatcgtatggagcagctatatggcagatcccggag 394
Query: 301 ttatatggcgagttaaattcccctcagctagagagaatcacatcgcttgacactgatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttatatggcgagttaaattcccctcagctagagagaatcacatcgcttgacactgatgct 454
Query: 361 tctaagattaaatgcattctttggtggccatctggaaggcatgataaattgatcagcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tctaagattaaatgcattctttggtggccatctggaaggcatgataaattgatcagcatt 514
Query: 421 aatgaggaaaacttgtgcttgtggaatttggatgtttccaagaaaactgcacaggtacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aatgaggaaaacttgtgcttgtggaatttggatgtttccaagaaaactgcacaggtacaa 574
Query: 481 tctaaagattcagctggtgtgctgcacaagttatcaggaggggcatgggatccgcatgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tctaaagattcagctggtgtgctgcacaagttatcaggaggggcatgggatccgcatgat 634
Query: 541 gtgaattctgttgctgcaacttgtgaatcatatctccagttttgggatgtcagaacaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gtgaattctgttgctgcaacttgtgaatcatatctccagttttgggatgtcagaacaatg 694
Query: 601 aagaagactaattcaattgagtgttcccatgtatgcggtgttgattacgatccttgcaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aagaagactaattcaattgagtgttcccatgtatgcggtgttgattacgatccttgcaag 754
Query: 661 aagcacatacttgttactgcagaacatgagtctgggatacatgtttgggatctaagaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aagcacatacttgttactgcagaacatgagtctgggatacatgtttgggatctaagaaat 814
Query: 721 ccgaaagttcccctccaagagcttccaggacatacacattggacatggagtgtcaagtgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ccgaaagttcccctccaagagcttccaggacatacacattggacatggagtgtcaagtgt 874
Query: 781 aacccagagtatgatggaatgatcctgagtgcgggtacagattcagctgttaacttgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 aacccagagtatgatggaatgatcctgagtgcgggtacagattcagctgttaacttgtgg 934
Query: 841 cttgcttctacaaaccttgatgagttaacaactgaaagtcaagcagattcgtcttcccgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 cttgcttctacaaaccttgatgagttaacaactgaaagtcaagcagattcgtcttcccgt 994
Query: 901 tgggttgatccattacttaatacatacagtgattatgaagacagcatttatgggctcaca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 tgggttgatccattacttaatacatacagtgattatgaagacagcatttatgggctcaca 1054
Query: 961 tggagttctcgtgaaccatggatctttgcatcattatcttatgatggcagggttgttgtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 tggagttctcgtgaaccatggatctttgcatcattatcttatgatggcagggttgttgtg 1114
Query: 1021 gaatccgttaagcctttcatctccaaaaaatgaagt 1056
||||||||||||||||||||||||||||||||||||
Sbjct: 1115 gaatccgttaagcctttcatctccaaaaaatgaagt 1150
>gnl|LJGI|DC599333 homologue to UniRef100_Q9LM97 Cluster: F2D10.2; n=1; Arabidopsis
thaliana|Rep: F2D10.2 - Arabidopsis thaliana (Mouse-ear
cress), partial (11%)
Length = 215
Score = 170 bits (86), Expect = 1e-41
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 146 tttcgtcgagtggaactgaactgttctgtgagggattgttttcgcacccgaacgagatct 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tttcgtcgagtggaactgaactgttctgtgagggattgttttcgcacccgaacgagatct 189
Query: 206 gggaccttgtttcctgcccttttgat 231
||||||||||||||||||||||||||
Sbjct: 190 gggaccttgtttcctgcccttttgat 215
>gnl|LJGI|AV778322 similar to UniRef100_Q9LMW1 Cluster: F5M15.14; n=1; Arabidopsis
thaliana|Rep: F5M15.14 - Arabidopsis thaliana (Mouse-ear
cress), partial (8%)
Length = 537
Score = 163 bits (82), Expect = 3e-39
Identities = 88/90 (97%)
Strand = Plus / Minus
Query: 673 gttactgcagaacatgagtctgggatacatgtttgggatctaagaaatccgaaagttccc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttactgcagaacatgagtctgggatacatgtttgggatctaagaaatccgaaagttccc 122
Query: 733 ctccaagagcttccaggacatacacattgg 762
|||| ||||||| |||||||||||||||||
Sbjct: 121 ctcccagagcttgcaggacatacacattgg 92
>gnl|LJGI|BP042448 similar to UniRef100_A7NVT6 Cluster: Chromosome chr18 scaffold_1
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (3%)
Length = 457
Score = 91.7 bits (46), Expect = 8e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 1011 ggttgttgtggaatccgttaagcctttcatctccaaaaaatgaagt 1056
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggttgttgtggaatccgttaagcctttcatctccaaaaaatgaagt 341