Miyakogusa Predicted Gene

Lj1g3v2268380.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2268380.1 Non Chatacterized Hit- tr|K3Y058|K3Y058_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si007569,47.47,2e-16,seg,NULL; coiled-coil,NULL,CUFF.28761.1
         (343 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66842 weakly similar to UniRef100_Q9LMV4 Cluster: F5M...   672   0.0  

>gnl|LJGI|TC66842 weakly similar to UniRef100_Q9LMV4 Cluster: F5M15.23; n=1;
           Arabidopsis thaliana|Rep: F5M15.23 - Arabidopsis
           thaliana (Mouse-ear cress), partial (8%)
          Length = 635

 Score =  672 bits (339), Expect = 0.0
 Identities = 342/343 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacgatggcttctccctcatttccgtcaagcgcaggcggtggtggcggcgccggaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25  atgacgatggcttctccctcatttccgtcaagcgcaggcggtggtggcggcgccggaagc 84

                                                                       
Query: 61  tcgaagaggaagttagggttcttcgcgaacgtgataaaacgaaaggacagcttcattcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  tcgaagaggaagttagggttcttcgcgaacgtgataaaacgaaaggacagcttcattcaa 144

                                                                       
Query: 121 ctgttcgcgatgactggaattctgctcttaagcatgagatctctcggtcagaagtaccga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ctgttcgcgatgactggaattctgctcttaagcatgagatctctcggtcagaagtaccga 204

                                                                       
Query: 181 atccacggccttgaagaggacacgcacgcgctcagggaggagcacgactcgctcaacgag 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 atccacggccttgaagaggacacgcgcgcgctcagggaggagcacgactcgctcaacgag 264

                                                                       
Query: 241 cgtatgaagaacatcaagctcggactccgccgtgaagcttctcaagaccccaccggcctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgtatgaagaacatcaagctcggactccgccgtgaagcttctcaagaccccaccggcctc 324

                                                      
Query: 301 ttcgcttctcgcctccacgctctctttgacgaacaacgctgaa 343
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcgcttctcgcctccacgctctctttgacgaacaacgctgaa 367