Miyakogusa Predicted Gene
- Lj1g3v2267290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2267290.1 Non Chatacterized Hit- tr|I1KSN1|I1KSN1_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,80.56,0.00000000008,seg,NULL,gene.g32852.t1.1
(285 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77857 347 2e-95
gnl|LJGI|TC77934 214 2e-55
gnl|LJGI|TC71077 similar to UniRef100_Q5D1M3 Cluster: Class III ... 192 8e-49
gnl|LJGI|TC70036 167 5e-41
gnl|LJGI|TC76809 weakly similar to UniRef100_Q71DF4 Cluster: CG4... 62 2e-09
>gnl|LJGI|TC77857
Length = 1198
Score = 347 bits (175), Expect = 2e-95
Identities = 181/183 (98%)
Strand = Plus / Plus
Query: 103 agatttgacatccaaattagtgatctgaacttgtttgagattgagtataggaaaagaact 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agatttgacatccaaattagtgatctgaacttgtttgagattgagtataggaaaagaact 627
Query: 163 gctcatgttgcagctaatgttgccagttcaagtcatatgaattttcatgaagtagatggt 222
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 628 gctcatgttgcagctaatgttgcaagttcaagtcatctgaattttcatgaagtagatggt 687
Query: 223 tcggttataaatttaattagtgatgatgattctgagaatgaagttgaagatattgtgaat 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tcggttataaatttaattagtgatgatgattctgagaatgaagttgaagatattgtgaat 747
Query: 283 tag 285
|||
Sbjct: 748 tag 750
>gnl|LJGI|TC77934
Length = 633
Score = 214 bits (108), Expect = 2e-55
Identities = 125/128 (97%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 103 agatttgacatccaaattagtgatctgaacttgtttgagattgagtataggaaaagaact 162
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agatttgacatcccaattagtgatctgaacttgtttgagattgagtataggaaaagaact 567
Query: 163 gctcatgttgcagctaatgttgccagttcaagtcatatgaattttcatgaagtagatggt 222
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 568 gctcatgttgcagctaatgttg-cagttc-agtcatatgaattttcatgaagtagatggt 625
Query: 223 tcggttat 230
||||||||
Sbjct: 626 tcggttat 633
>gnl|LJGI|TC71077 similar to UniRef100_Q5D1M3 Cluster: Class III HD-Zip protein 4;
n=1; Populus trichocarpa|Rep: Class III HD-Zip protein 4
- Populus trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (20%)
Length = 702
Score = 192 bits (97), Expect = 8e-49
Identities = 100/101 (99%)
Strand = Plus / Plus
Query: 4 gcaattgctccctctcgagtcagcacccagatgggcccgaaaccacttcctggttcacca 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaattgctccctctcgactcagcacccagatgggcccgaaaccacttcctggttcacca 60
Query: 64 gaggctgttaccttggttcgttggatctgtagaagttacag 104
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaggctgttaccttggttcgttggatctgtagaagttacag 101
>gnl|LJGI|TC70036
Length = 546
Score = 167 bits (84), Expect = 5e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 202 aattttcatgaagtagatggttcggttataaatttaattagtgatgatgattctgagaat 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattttcatgaagtagatggttcggttataaatttaattagtgatgatgattctgagaat 60
Query: 262 gaagttgaagatattgtgaattag 285
||||||||||||||||||||||||
Sbjct: 61 gaagttgaagatattgtgaattag 84
>gnl|LJGI|TC76809 weakly similar to UniRef100_Q71DF4 Cluster: CG4363; n=1; Drosophila
yakuba|Rep: CG4363 - Drosophila yakuba (Fruit fly),
partial (9%)
Length = 679
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 233 atttaattagtgatgatgattctgagaatgaagttgaagatattgtg 279
||||| |||||||||||||||||| | | ||||||||||||||||||
Sbjct: 83 atttagttagtgatgatgattctgtggaagaagttgaagatattgtg 129