Miyakogusa Predicted Gene

Lj1g3v2267250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2267250.1 gene.g32851.t1.1
         (708 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS356769 similar to UniRef100_UPI00006A1640 Cluster: Hi...   541   e-153
gnl|LJGI|TC61925 similar to UniRef100_A0GYU3 Cluster: Oxidoreduc...    76   3e-13

>gnl|LJGI|FS356769 similar to UniRef100_UPI00006A1640 Cluster: Histone H1.5 (Histone
           H1a).; n=1; Xenopus tropicalis|Rep: Histone H1.5
           (Histone H1a). - Xenopus tropicalis, partial (9%)
          Length = 657

 Score =  541 bits (273), Expect = e-153
 Identities = 273/273 (100%)
 Strand = Plus / Minus

                                                                       
Query: 436 cggagacccagaggcaggccaaagaagaccgaggctaagggaagcatgaaggttccgccg 495
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cggagacccagaggcaggccaaagaagaccgaggctaagggaagcatgaaggttccgccg 598

                                                                       
Query: 496 gtgactatggccgatgcagcgaccaatggtgaggaggtgtcaaccggaaaagagctgatg 555
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtgactatggccgatgcagcgaccaatggtgaggaggtgtcaaccggaaaagagctgatg 538

                                                                       
Query: 556 gttctctctaaggagctctctaatccctatagcgtaatgacgcatgcaagaagtgctatc 615
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gttctctctaaggagctctctaatccctatagcgtaatgacgcatgcaagaagtgctatc 478

                                                                       
Query: 616 ttgatggggaagcggcttgggatgacgtacgactgcccagacttcatagctgaaggtgag 675
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttgatggggaagcggcttgggatgacgtacgactgcccagacttcatagctgaaggtgag 418

                                            
Query: 676 atcgcgacacaaattttggctagaagggtttga 708
           |||||||||||||||||||||||||||||||||
Sbjct: 417 atcgcgacacaaattttggctagaagggtttga 385


>gnl|LJGI|TC61925 similar to UniRef100_A0GYU3 Cluster: Oxidoreductase-like; n=1;
           Chloroflexus aggregans DSM 9485|Rep: Oxidoreductase-like
           - Chloroflexus aggregans DSM 9485, partial (5%)
          Length = 761

 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 1   atgtggcatcgccaactcatcttcatgttactacctac 38
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 724 atgtggcatcgccaactcatcttcatgttactacctac 761