Miyakogusa Predicted Gene
- Lj1g3v2264820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2264820.1 Non Chatacterized Hit- tr|D8TJU3|D8TJU3_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,44.96,5e-19,seg,NULL; cyanin_plasto: plastocyanin,Plastocyanin;
COPPER_BLUE,Blue (type 1) copper domain; Copper-,CUFF.28771.1
(504 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63080 similar to UniRef100_P16002 Cluster: Plastocyan... 999 0.0
gnl|LJGI|TC76885 381 e-105
gnl|LJGI|AV770099 similar to UniRef100_P35477 Cluster: Plastocya... 335 2e-91
>gnl|LJGI|TC63080 similar to UniRef100_P16002 Cluster: Plastocyanin, chloroplast
precursor; n=1; Pisum sativum|Rep: Plastocyanin,
chloroplast precursor - Pisum sativum (Garden pea),
partial (97%)
Length = 753
Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus
Query: 1 atggccaccgtcacttccaccgccgttgctattccatcattcaccggccttaagtcagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atggccaccgtcacttccaccgccgttgctattccatcattcaccggccttaagtcagcc 135
Query: 61 ggaagcaaagtcagtgccagtgctaaggtgtcatcatcaccttcccaaatgccaaggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ggaagcaaagtcagtgccagtgctaaggtgtcatcatcaccttcccaaatgccaaggctc 195
Query: 121 agcgtcaaggcttcactcaaggactttggagttgctgttgttgccactgctgcatccgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 agcgtcaaggcttcactcaaggactttggagttgctgttgttgccactgctgcatccgca 255
Query: 181 gtgctagctagcaacgccatggccattgaaatcttgctcggtagtgatgatggtggtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtgctagctagcaacgccatggccattgaaatcttgctcggtagtgatgatggtggtctg 315
Query: 241 gcttttgttcccaactctttctcagtggctcctggggagaagatcacgttcaagaacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcttttgttcccaactctttctcagtggctcctggggagaagatcacgttcaagaacaat 375
Query: 301 gctggtttccctcacaacgttgtcttcgacgaggatgaggttcctggcggtgttgatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gctggtttccctcacaacgttgtcttcgacgaggatgaggttcctggcggtgttgatgct 435
Query: 361 tccaagatctccatgtctgatgaagatcttctcaacgcgcctggtgagacttacagtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tccaagatctccatgtctgatgaagatcttctcaacgcgcctggtgagacttacagtgtt 495
Query: 421 accctggatgctaagggtacttacaagttctactgttcccctcaccaaggtgctggtatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 accctggatgctaagggtacttacaagttctactgttcccctcaccaaggtgctggtatg 555
Query: 481 gttggaagcgtcactgttaattaa 504
||||||||||||||||||||||||
Sbjct: 556 gttggaagcgtcactgttaattaa 579
>gnl|LJGI|TC76885
Length = 624
Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Minus
Query: 1 atggccaccgtcacttccaccgccgttgctattccatcattcaccggccttaagtcagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atggccaccgtcacttccaccgccgttgctattccatcattcaccggccttaagtcagcc 133
Query: 61 ggaagcaaagtcagtgccagtgctaaggtgtcatcatcaccttcccaaatgccaaggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ggaagcaaagtcagtgccagtgctaaggtgtcatcatcaccttcccaaatgccaaggctc 73
Query: 121 agcgtcaaggcttcactcaaggactttggagttgctgttgttgccactgctgcatccgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agcgtcaaggcttcactcaaggactttggagttgctgttgttgccactgctgcatccgca 13
Query: 181 gtgctagctagc 192
||||||||||||
Sbjct: 12 gtgctagctagc 1
>gnl|LJGI|AV770099 similar to UniRef100_P35477 Cluster: Plastocyanin B'/B''; n=1;
Nicotiana tabacum|Rep: Plastocyanin B'/B'' - Nicotiana
tabacum (Common tobacco), partial (62%)
Length = 438
Score = 335 bits (169), Expect = 2e-91
Identities = 233/253 (92%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 249 tcccaactctttctcagtggctcctggggagaagatcacgttcaagaacaatgctggttt 308
|||| |||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 438 tccccactctttctcagtggctcctggggagaagatcacgttccagtaccatgctggttt 379
Query: 309 ccctcacaacgttgtcttcgacgaggatgaggttcctggcggtgttgatgcttccaagat 368
||||| | |||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 378 ccctccccacgttgtctttgacgaggatgaggtttctggcggtgttgatgcttcccagat 319
Query: 369 ctccatgtctgatgaagatcttctcaacgcgcctggtgagacttacagtgttaccctgga 428
|||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||
Sbjct: 318 ctccatgtctgatgaagatcttttctacgcgcctggtgagacttacagtgttaacctgga 259
Query: 429 tgctaagggtactta-caagttctactgttcccctcaccaaggtgctggtatggttggaa 487
|||||||||||| || | |||| ||||||||||||| || ||| |||||||||||||| |
Sbjct: 258 tgctaagggtacgtagccagttatactgttcccctcccccaggcgctggtatggttggga 199
Query: 488 gcgtcactgttaa 500
|||||||||||||
Sbjct: 198 gcgtcactgttaa 186