Miyakogusa Predicted Gene
- Lj1g3v2251610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2251610.1 Non Chatacterized Hit- tr|I1JSZ3|I1JSZ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43900 PE,82.7,0,Prolyl
4-hydroxylase alpha subunit homologue,Prolyl 4-hydroxylase, alpha
subunit; seg,NULL; 2OG-FeII,CUFF.28747.1
(861 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67338 similar to UniRef100_A7NVN3 Cluster: Chromosome... 1707 0.0
gnl|LJGI|TC73234 similar to UniRef100_A7NVN3 Cluster: Chromosome... 1023 0.0
gnl|LJGI|AV415701 similar to UniRef100_A7NVN5 Cluster: Chromosom... 383 e-105
gnl|LJGI|AV766573 homologue to UniRef100_A7NVN3 Cluster: Chromos... 278 5e-74
gnl|LJGI|TC66663 similar to UniRef100_A7R3K3 Cluster: Chromosome... 149 3e-35
gnl|LJGI|TC65749 similar to UniRef100_A7NVN3 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC67182 similar to UniRef100_A7NVN3 Cluster: Chromosome... 62 6e-09
gnl|LJGI|DC594383 similar to UniRef100_A7NVN3 Cluster: Chromosom... 52 6e-06
>gnl|LJGI|TC67338 similar to UniRef100_A7NVN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 1124
Score = 1707 bits (861), Expect = 0.0
Identities = 861/861 (100%)
Strand = Plus / Plus
Query: 1 atggcgaaaggaaagttcacgcatacaagatcacaggggaagcgatggtcgacggttacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggcgaaaggaaagttcacgcatacaagatcacaggggaagcgatggtcgacggttacg 98
Query: 61 ctcgttgcgtcaatgcttttcatgctcacactggttattctcttgctccttgcactcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ctcgttgcgtcaatgcttttcatgctcacactggttattctcttgctccttgcactcggc 158
Query: 121 attgtttatcttccaactaccgacgacgattctccgatcacggatctcagttccttccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 attgtttatcttccaactaccgacgacgattctccgatcacggatctcagttccttccgg 218
Query: 181 cgtagaacctctcaaagtttggaagagaatcaggagcagtggaccgaaattctctcctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cgtagaacctctcaaagtttggaagagaatcaggagcagtggaccgaaattctctcctgg 278
Query: 241 gagccgagagctttcatttttcacaatttcctgtcaaaagtagaatgtgaatacatgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gagccgagagctttcatttttcacaatttcctgtcaaaagtagaatgtgaatacatgatc 338
Query: 301 aatcttgccaaacctcacatggcaaaatcaagtgttgttgatagccagactggaaagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aatcttgccaaacctcacatggcaaaatcaagtgttgttgatagccagactggaaagagt 398
Query: 361 gtagaaagcagggttcgaactagttcaggaatgtttttgaagagaggaaaggacaaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtagaaagcagggttcgaactagttcaggaatgtttttgaagagaggaaaggacaaagtt 458
Query: 421 atccagactatagaaaaaagaattgctgactttgccttcataccagtagagaatggagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 atccagactatagaaaaaagaattgctgactttgccttcataccagtagagaatggagaa 518
Query: 481 ggacttcaggttcttcactatgaagttgggcagaaatatgaacctcactatgattacttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggacttcaggttcttcactatgaagttgggcagaaatatgaacctcactatgattacttc 578
Query: 541 cttgatgagttcaacactaaaaatggaggccaacgtattgctacagttcttatgtacctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cttgatgagttcaacactaaaaatggaggccaacgtattgctacagttcttatgtacctt 638
Query: 601 tcagatgttgaagaaggtggtgagaccatatttcctgctgccaaggcaaactttagttct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tcagatgttgaagaaggtggtgagaccatatttcctgctgccaaggcaaactttagttct 698
Query: 661 gtgccatggtataatgatttatctgtatgtgctaaaaagggtctatcagtgaaaccaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gtgccatggtataatgatttatctgtatgtgctaaaaagggtctatcagtgaaaccaaaa 758
Query: 721 aggggtgatgctctgctgttttggagcataaggccagatgccacactagatccatcaagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aggggtgatgctctgctgttttggagcataaggccagatgccacactagatccatcaagt 818
Query: 781 ttacatggtggttgcccagtaattagaggaaataaatggtcttcaacgaagtggatgcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ttacatggtggttgcccagtaattagaggaaataaatggtcttcaacgaagtggatgcat 878
Query: 841 cttgaggagtacaaagtttga 861
|||||||||||||||||||||
Sbjct: 879 cttgaggagtacaaagtttga 899
>gnl|LJGI|TC73234 similar to UniRef100_A7NVN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 723
Score = 1023 bits (516), Expect = 0.0
Identities = 529/532 (99%), Gaps = 1/532 (0%)
Strand = Plus / Plus
Query: 1 atggcgaaaggaaagttcacgcatacaagatcacaggggaagcgatggtcgacggttacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atggcgaaaggaaagttcacgcatacaagatcacaggggaagcgatggtcgacggttacg 252
Query: 61 ctcgttgcgtcaatgcttttcatgctcacactggttattctcttgctccttgcactcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctcgttgcgtcaatgcttttcatgctcacactggttattctcttgctccttgcactcggc 312
Query: 121 attgtttatcttccaactaccgacgacgattctccgatcacggatctcagttccttccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 attgtttatcttccaactaccgacgacgattctccgatcacggatctcagttccttccgg 372
Query: 181 cgtagaacctctcaaagtttggaagagaatcaggagcagtggaccgaaattctctcctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cgtagaacctctcaaagtttggaagagaatcaggagcagtggaccgaaattctctcctgg 432
Query: 241 gagccgagagctttcatttttcacaatttcctgtcaaaagtagaatgtgaatacatgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gagccgagagctttcatttttcacaatttcctgtcaaaagtagaatgtgaatacatgatc 492
Query: 301 aatcttgccaaacctcacatggcaaaatcaagtgttgttgatagccagactggaaagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aatcttgccaaacctcacatggcaaaatcaagtgttgttgatagccagactggaaagagt 552
Query: 361 gtagaaagcagggttcgaactagttcaggaatgtttttgaagagaggaaaggacaaagtt 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtaggaagcagggttcgaactagttcaggaatgtttttgaagagaggaaaggacaaagtt 612
Query: 421 atccagactatagaaaaaagaattgctgactttgccttcataccagtagagaatggagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atccagactatagaaaaaagaattgctgactttgccttcataccagtagagaatggagaa 672
Query: 481 ggacttcaggttcttcactatgaagttgggcagaaatatgaacctcactatg 532
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agacttca-gttcttcactatgaagttgggcagaaatatgaacctcactatg 723
>gnl|LJGI|AV415701 similar to UniRef100_A7NVN5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 418
Score = 383 bits (193), Expect = e-105
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atggcgaaaggaaagttcacgcatacaagatcacaggggaagcgatggtcgacggttacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atggcgaaaggaaagttcacgcatacaagatcacaggggaagcgatggtcgacggttacg 285
Query: 61 ctcgttgcgtcaatgcttttcatgctcacactggttattctcttgctccttgcactcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctcgttgcgtcaatgcttttcatgctcacactggttattctcttgctccttgcactcggc 345
Query: 121 attgtttatcttccaactaccgacgacgattctccgatcacggatctcagttccttccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 attgtttatcttccaactaccgacgacgattctccgatcacggatctcagttccttccgg 405
Query: 181 cgtagaacctctc 193
|||||||||||||
Sbjct: 406 cgtagaacctctc 418
>gnl|LJGI|AV766573 homologue to UniRef100_A7NVN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 305
Score = 278 bits (140), Expect = 5e-74
Identities = 140/140 (100%)
Strand = Plus / Minus
Query: 722 ggggtgatgctctgctgttttggagcataaggccagatgccacactagatccatcaagtt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggggtgatgctctgctgttttggagcataaggccagatgccacactagatccatcaagtt 246
Query: 782 tacatggtggttgcccagtaattagaggaaataaatggtcttcaacgaagtggatgcatc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tacatggtggttgcccagtaattagaggaaataaatggtcttcaacgaagtggatgcatc 186
Query: 842 ttgaggagtacaaagtttga 861
||||||||||||||||||||
Sbjct: 185 ttgaggagtacaaagtttga 166
>gnl|LJGI|TC66663 similar to UniRef100_A7R3K3 Cluster: Chromosome undetermined
scaffold_533, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_533,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (77%)
Length = 986
Score = 149 bits (75), Expect = 3e-35
Identities = 195/235 (82%)
Strand = Plus / Plus
Query: 436 aaaagaattgctgactttgccttcataccagtagagaatggagaaggacttcaggttctt 495
|||| ||||||||||||| | || || || |||||| |||| ||||||||||| |||||
Sbjct: 656 aaaaaaattgctgactttacttttattcctgtagagcatggtgaaggacttcaagttcta 715
Query: 496 cactatgaagttgggcagaaatatgaacctcactatgattacttccttgatgagttcaac 555
|| ||||| ||||| || || ||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 716 cattatgaggttggacaaaagtatgagcctcactatgactactttcttgatgagtttaac 775
Query: 556 actaaaaatggaggccaacgtattgctacagttcttatgtacctttcagatgttgaagaa 615
||||| ||||| || || ||||| || ||||| || ||||||||| | ||||||||||||
Sbjct: 776 actaagaatgggggtcagcgtatagcaacagtactgatgtaccttaccgatgttgaagaa 835
Query: 616 ggtggtgagaccatatttcctgctgccaaggcaaactttagttctgtgccatggt 670
|| |||||||| | || || ||||||| | || |||||||||||||||||||
Sbjct: 836 ggaggtgagacagtgttcccatctgccaaagggaattttagttctgtgccatggt 890
>gnl|LJGI|TC65749 similar to UniRef100_A7NVN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 694
Score = 63.9 bits (32), Expect = 2e-09
Identities = 119/148 (80%)
Strand = Plus / Plus
Query: 467 tagagaatggagaaggacttcaggttcttcactatgaagttgggcagaaatatgaacctc 526
||||| |||| ||||||||||| ||||| || ||||||||||| || || ||||| |||
Sbjct: 547 tagagcatggtgaaggacttcaagttctccattatgaagttggacaaaagtatgattctc 606
Query: 527 actatgattacttccttgatgagttcaacactaaaaatggaggccaacgtattgctacag 586
| ||||| ||||| | || ||||| |||||||| || || || || ||| | || |||
Sbjct: 607 attatgactactttatggacgagtttaacactaagaacggtggtcagcgtctagcaacaa 666
Query: 587 ttcttatgtacctttcagatgttgaaga 614
| || ||||||||||| |||||||||||
Sbjct: 667 tgctgatgtacctttccgatgttgaaga 694
>gnl|LJGI|TC67182 similar to UniRef100_A7NVN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 717
Score = 61.9 bits (31), Expect = 6e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 724 ggtgatgctctgctgttttggagcataaggccagatgccacactagatccatcaagttta 783
||||||||| | || || |||||||| | ||||||||| || ||||||||||||| |||
Sbjct: 195 ggtgatgctttacttttctggagcatgaagccagatgcaactttagatccatcaagctta 254
Query: 784 catggtggttg 794
|||||||||||
Sbjct: 255 catggtggttg 265
>gnl|LJGI|DC594383 similar to UniRef100_A7NVN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 577
Score = 52.0 bits (26), Expect = 6e-06
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 467 tagagaatggagaaggacttcaggttcttcactatgaagttgggcagaaatatgaacctc 526
||||| |||| ||||||||||| ||||| || ||||||||||| || || ||||| |||
Sbjct: 479 tagagcatggtgaaggacttcaagttctccattatgaagttggacaaaagtatgattctc 538
Query: 527 actatgattacttccttgatgagttcaacactaa 560
| ||||| ||||| | || ||||| ||||||||
Sbjct: 539 attatgactactttatggacgagtttaacactaa 572