Miyakogusa Predicted Gene

Lj1g3v2195330.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2195330.1 tr|G7J5A1|G7J5A1_MEDTR GDSL esterase/lipase
OS=Medicago truncatula GN=MTR_3g114090 PE=4
SV=1,74.29,0,LIPASE_GDSL_SER,Lipase, GDSL, active site;
Lipase_GDSL,Lipase, GDSL; LATERAL SIGNALING TARGET PROTEI,CUFF.28709.1
         (1080 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71993 similar to UniRef100_A7NSS0 Cluster: Chromosome...    68   1e-10
gnl|LJGI|TC74662 weakly similar to UniRef100_A7NSR6 Cluster: Chr...    62   8e-09

>gnl|LJGI|TC71993 similar to UniRef100_A7NSS0 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 568

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                       
Query: 178 tgcaatttccctccatatggaaaagatttcaagggaggcataccaactggtcgatttggc 237
           |||||||| ||||| ||||| ||||||||  ||||||| |  ||||||||| ||||  ||
Sbjct: 297 tgcaattttcctccttatggtaaagattttgagggaggaaacccaactggtagattctgc 356

                                                             
Query: 238 aatggaaaagttccatctgactttgtagttgaagaattgggcattaagga 287
           ||||||||| ||||||| |||||  | | |||||||||||| || |||||
Sbjct: 357 aatggaaaaattccatcagacttgcttgctgaagaattgggtatcaagga 406


>gnl|LJGI|TC74662 weakly similar to UniRef100_A7NSR6 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (48%)
          Length = 852

 Score = 61.9 bits (31), Expect = 8e-09
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                       
Query: 822 caggacggtttaccttgatgtttataatcctctgcttgacctcattgtaaactaccaaaa 881
           ||||| ||||||| |||||||||| || || || |||||| ||||| | ||| || ||||
Sbjct: 400 caggatggtttacattgatgtttacaacccactccttgacatcattattaaccacaaaaa 459

                                                      
Query: 882 ttatggttataaagttggagacagaggatgctgtggcacagga 924
            ||||| ||||| || | ||||| |||||| ||||||||||||
Sbjct: 460 atatgggtataatgtcgaagacaaaggatgttgtggcacagga 502