Miyakogusa Predicted Gene

Lj1g3v2185240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2185240.1 tr|B9GQS6|B9GQS6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_550861 PE=4
SV=1,45.56,1e-16,seg,NULL,CUFF.28704.1
         (748 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77776 similar to UniRef100_Q10P95 Cluster: Expressed ...   531   e-150
gnl|LJGI|AV425390 similar to UniRef100_A8DYG6 Cluster: CG34189-P...    68   9e-11

>gnl|LJGI|TC77776 similar to UniRef100_Q10P95 Cluster: Expressed protein; n=1; Oryza
           sativa Japonica Group|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice), partial (10%)
          Length = 598

 Score =  531 bits (268), Expect = e-150
 Identities = 268/268 (100%)
 Strand = Plus / Plus

                                                                       
Query: 481 tccgcttccgagaatcggtggggacctgacccgaaagaccttcccaagcatctgcctgtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tccgcttccgagaatcggtggggacctgacccgaaagaccttcccaagcatctgcctgtt 60

                                                                       
Query: 541 gttttgacctcgaaggaggaaccggtggacatgtttttaggatcctcgggtttcaatctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttttgacctcgaaggaggaaccggtggacatgtttttaggatcctcgggtttcaatctg 120

                                                                       
Query: 601 atttcgccaccgccgagcagcttgccgctgccgaaattctctctgagatcgaagctcagc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttcgccaccgccgagcagcttgccgctgccgaaattctctctgagatcgaagctcagc 180

                                                                       
Query: 661 tgcaacgcggaagcctccgcggcggggagtgttgttgatgacgacggagcaaccaataat 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcaacgcggaagcctccgcggcggggagtgttgttgatgacgacggagcaaccaataat 240

                                       
Query: 721 ctccggcgacttctacgccttatgtgaa 748
           ||||||||||||||||||||||||||||
Sbjct: 241 ctccggcgacttctacgccttatgtgaa 268


>gnl|LJGI|AV425390 similar to UniRef100_A8DYG6 Cluster: CG34189-PA; n=1; Drosophila
           melanogaster|Rep: CG34189-PA - Drosophila melanogaster
           (Fruit fly), partial (14%)
          Length = 326

 Score = 67.9 bits (34), Expect = 9e-11
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 1   atggattctgttttgactcttcacgcaatggaac 34
           ||||||||||||||||||||||||||||||||||
Sbjct: 293 atggattctgttttgactcttcacgcaatggaac 326