Miyakogusa Predicted Gene
- Lj1g3v2184140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2184140.1 Non Chatacterized Hit- tr|I1HFP9|I1HFP9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,53.93,5e-19,coiled-coil,NULL; seg,NULL,CUFF.28693.1
(699 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78110 416 e-116
gnl|LJGI|AV411760 homologue to UniRef100_A7NSV1 Cluster: Chromos... 361 4e-99
>gnl|LJGI|TC78110
Length = 508
Score = 416 bits (210), Expect = e-116
Identities = 224/231 (96%)
Strand = Plus / Plus
Query: 469 tctccagttaaggctgtagctgttgtgaagagcagcacaaaatctgttacagttacgnnn 528
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctccagttaaggctgtagctgttgtgaagagcagcacaaaatctgttacagttacgaaa 60
Query: 529 nnnngtacaccctcccctgcaccttcccttacaaagaaggcaacgaactccgcatcaaag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaagtacaccctcccctgcaccttcccttacaaagaaggcaacgaactccgcatcaaag 120
Query: 589 gcgccgcccaagaagagaaaatctgagtcgataagctccgaggatgatgactctgattat 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgccgcccaagaagagaaaatctgagtcgataagctccgaggatgatgactctgattat 180
Query: 649 ggcactggttcaaaagcaccagcaaagaagaggaaaaaagtagcttgatta 699
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcactggttcaaaagcaccagcaaagaagaggaaaaaagtagcttgatta 231
>gnl|LJGI|AV411760 homologue to UniRef100_A7NSV1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 420
Score = 361 bits (182), Expect = 4e-99
Identities = 182/182 (100%)
Strand = Plus / Plus
Query: 1 atgccgtcggaagattcgaatatcgtgaaaacagaggaggagaattcggttcccaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgccgtcggaagattcgaatatcgtgaaaacagaggaggagaattcggttcccaagaaa 126
Query: 61 actgcaaatgccaagaaaaaacccgttaccccggcgtctcgctccaatgccaagaaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 actgcaaatgccaagaaaaaacccgttaccccggcgtctcgctccaatgccaagaaggaa 186
Query: 121 ctcaattacagcgacgacgacgacatgcccatcgctaaaagaaccaccgtttccaaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctcaattacagcgacgacgacgacatgcccatcgctaaaagaaccaccgtttccaaggag 246
Query: 181 gt 182
||
Sbjct: 247 gt 248
Score = 167 bits (84), Expect = 1e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 271 gtttatgatttacctggtcagaaacgagatccacctgaggagaaagaccctcttaggatt 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gtttatgatttacctggtcagaaacgagatccacctgaggagaaagaccctcttaggatt 396
Query: 331 ttctatgagacattgtacgagcaa 354
||||||||||||||||||||||||
Sbjct: 397 ttctatgagacattgtacgagcaa 420