Miyakogusa Predicted Gene
- Lj1g3v2162770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2162770.1 Non Chatacterized Hit- tr|F6HGJ5|F6HGJ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.73,6e-18,Myb_DNA-bind_3,Myb/SANT-like domain,CUFF.28668.1
(891 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO005974 similar to UniRef100_A7P834 Cluster: Chromosom... 1122 0.0
gnl|LJGI|BP045012 513 e-145
gnl|LJGI|TC65518 weakly similar to UniRef100_A7QDU4 Cluster: Chr... 287 6e-77
gnl|LJGI|GO037289 similar to UniRef100_A7P834 Cluster: Chromosom... 123 2e-27
>gnl|LJGI|GO005974 similar to UniRef100_A7P834 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 663
Score = 1122 bits (566), Expect = 0.0
Identities = 569/570 (99%)
Strand = Plus / Plus
Query: 1 atggaaatcgaatctagtaatcagcccaagcaagagcgttcgaggacaagatggacagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atggaaatcgaatctagtaatcagcccaagcaagagcgttcgaggacaagatggacagca 153
Query: 61 tcacttgacaagatatttgcagacttggttgtcaagcacatccaactaggaaacagacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tcacttgacaagatatttgcagacttggttgtcaagcacatccaactaggaaacagacca 213
Query: 121 aacgatgtttttgacaagaaaacatggaatcacattcgtgacgacttcaataagcaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aacgatgtttttgacaagaaaacatggaatcacattcgtgacgacttcaataagcaaacc 273
Query: 181 gacctcaatttcaataacaatcaattgaggaagcatctagacgttctccgaacacgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gacctcaatttcaataacaatcaattgaggaagcatctagacgttctccgaacacgcttc 333
Query: 241 cataatctgaaatctgcttatgatcaaaataacggctttgtaatagatgattcctgttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cataatctgaaatctgcttatgatcaaaataacggctttgtaatagatgattcctgttgc 393
Query: 301 attggctttgaactgtgggaagacacaggggcacaacctagacctgaaatagttaaagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 attggctttgaactgtgggaagacacaggggcacaacctagacctgaaatagttaaagtg 453
Query: 361 aaagattgtcccatatatgagcagctgtgcacaatattctcagattcagctgcagtgcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaagattgtcccatatatgagcagctgtgcacaatattctcagattcagctgcagtgcca 513
Query: 421 gatgggaaatatgcccaatctagtcattatgaagtggatgccactagcttaatttcatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gatgggaaatatgcccaatctagtcattatgaagtggatgccactagcttaatttcatgt 573
Query: 481 tcagaagctggggtctcaaatcatcaatacccatcatcatcaaaacccatcttaactgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tcagaagctggggtctcaaatcatcaatacccatcatcatcaaaacccatcttaactgca 633
Query: 541 gagaatgtaactaagaattctcttgatagg 570
||||||||||||||||||||||| ||||||
Sbjct: 634 gagaatgtaactaagaattctctcgatagg 663
>gnl|LJGI|BP045012
Length = 445
Score = 513 bits (259), Expect = e-145
Identities = 263/265 (99%)
Strand = Plus / Minus
Query: 627 tgctatggcagaggccttgttagagatggttggtgcttataggttaaggacaattgtttc 686
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgctatgncagagnccttgttagagatggttggtgcttataggttaaggacaattgtttc 386
Query: 687 aactgtaggtgatgataaattttccgtaaccaattgcattagggcacttgatgaggtaga 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactgtaggtgatgataaattttccgtaaccaattgcattagggcacttgatgaggtaga 326
Query: 747 tggcatcaacgaacagctctacttttctgcattggagctctttgaggatcctagtttaag 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggcatcaacgaacagctctacttttctgcattggagctctttgaggatcctagtttaag 266
Query: 807 agagatattcatttctttaaaatgtgacaagatacgactggcttggttacaaggtaagtg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agagatattcatttctttaaaatgtgacaagatacgactggcttggttacaaggtaagtg 206
Query: 867 tagtaggaggaacattccttagatg 891
|||||||||||||||||||||||||
Sbjct: 205 tagtaggaggaacattccttagatg 181
>gnl|LJGI|TC65518 weakly similar to UniRef100_A7QDU4 Cluster: Chromosome chr4
scaffold_83, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_83, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (33%)
Length = 979
Score = 287 bits (145), Expect = 6e-77
Identities = 357/428 (83%), Gaps = 6/428 (1%)
Strand = Plus / Plus
Query: 25 cccaagcaagagcgttcgaggacaagatggacagcatcacttgacaagatatttgcagac 84
|||||||||||||||| || ||||||||||||||||| || ||||| ||||||||||||
Sbjct: 4 cccaagcaagagcgttttagaacaagatggacagcatccctggacaaaatatttgcagac 63
Query: 85 ttggttgtcaagcacatccaactaggaaacagaccaaacgatgtttttgacaagaaaaca 144
||||| |||||||| || ||||| || ||||| | || || |||| || |||||||||
Sbjct: 64 ttggtagtcaagcagattcaactggggaacaggtccaattatattttcgataagaaaaca 123
Query: 145 tggaatcacattcgtgacgacttcaataagcaaaccgacctcaatttcaataacaatcaa 204
|||||||| || ||||| || || || | |||||||||||| ||||||||||| ||||||
Sbjct: 124 tggaatcatatccgtgatgagtttaacaggcaaaccgaccttaatttcaataataatcaa 183
Query: 205 ttgaggaagcatctagacgttctccgaacacgcttccataatctgaaatctgcttatgat 264
|| |||||||||||||| ||||| || | || | | | ||| |||||||||||||||||
Sbjct: 184 ttaaggaagcatctagatgttcttcggatgcgttacaacaatttgaaatctgcttatgat 243
Query: 265 caaaataacggctttgtaatagatgattcctgttgcattggctttgaactgtgggaagac 324
|| ||||| |||||| || | ||||| ||| ||||||||| ||||||| ||||||||||
Sbjct: 244 cataataatggctttctattggatgactccatttgcattggatttgaacagtgggaagac 303
Query: 325 acaggggcacaacctagacctgaaatagttaaagtgaaagattgtcccatatatgagcag 384
| ||||||||| || || ||||| ||||| ||| ||||||||||| ||||||||||||
Sbjct: 304 ataggggcacagccaaggaatgaaacagttagagtaaaagattgtccaatatatgagcag 363
Query: 385 ctgtgcacaatattctcagattcagctgcagtgccagatgggaaatatgcccaatctagt 444
|| || |||||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 364 ctttgtacaatatttgtagattcagctg------ctgatgggaaatatgcccaatctagt 417
Query: 445 cattatga 452
||||||||
Sbjct: 418 cattatga 425
Score = 127 bits (64), Expect = 1e-28
Identities = 258/320 (80%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 553 aagaattctcttgataggaaaaagaaacgtccatc-tgagatgcaaacaactagtctcga 611
||||||||||| |||||||| | |||||||| ||| ||||| ||||| |||| ||| ||
Sbjct: 529 aagaattctctagataggaagaggaaacgtc-atcatgagactcaaactactactctgga 587
Query: 612 tcaagacagctgtgatgctatggcagaggccttgttagagatggttggtgcttataggtt 671
||||| || || ||||||||||| | |||||||| || ||| ||| || || ||||
Sbjct: 588 tcaaggcacttgcgatgctatggctggagccttgtttgaaatgattgctgtttcaaggtc 647
Query: 672 aaggacaattgtttcaactgtaggtgatgataaattttccgtaaccaattgcattagggc 731
|||| || ||||||||| || | ||||||||||||||||| |||| || |||||||||||
Sbjct: 648 aagggcagttgtttcaagtgcaagtgatgataaattttccataacaaactgcattagggc 707
Query: 732 acttgatgaggtagatggcatcaacgaacagctctacttttctgcattggagctctttga 791
|| |||||| || | | ||| | ||| |||||| ||||||||| |||| || |||||
Sbjct: 708 tctggatgagatacaagacattgatcaactgctctatttttctgcactggacctgtttga 767
Query: 792 ggatcctagtttaagagagatattcatttctttaaaatgtgacaagatacgactggcttg 851
||| ||||| ||||| |||| |||||||| |||||| ||| |||||| || ||| | ||
Sbjct: 768 ggaccctagattaagggagactttcatttccttaaaaagtgtcaagattcggctgacatg 827
Query: 852 gttacaaggtaagtgtagta 871
||||||||| ||||| ||||
Sbjct: 828 gttacaaggaaagtgcagta 847
>gnl|LJGI|GO037289 similar to UniRef100_A7P834 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 287
Score = 123 bits (62), Expect = 2e-27
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 16 agtaatcagcccaagcaagagcgttcgaggacaagatggacagcatcacttgacaagata 75
|||| ||| |||||||||||| |||| || ||||||||||||||||| || ||||| |||
Sbjct: 124 agtattcaacccaagcaagagtgttctagaacaagatggacagcatccctggacaaaata 183
Query: 76 tttgcagacttggttgtcaagcacatccaactaggaaacagaccaaacgatgtttttgac 135
|||||||||||||| |||||||| || ||||| || ||||| || || ||| |||| ||
Sbjct: 184 tttgcagacttggtagtcaagcagattcaactggggaacaggcccaatgatattttcgat 243
Query: 136 aagaaaacatggaatcacattcgtga 161
||||||||||||||||| || |||||
Sbjct: 244 aagaaaacatggaatcatatccgtga 269