Miyakogusa Predicted Gene

Lj1g3v2156580.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2156580.2 CUFF.28660.2
         (1155 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76054 similar to UniRef100_A7QBE9 Cluster: Chromosome...    82   9e-15
gnl|LJGI|FS340221 similar to UniRef100_Q9C5B5 Cluster: E2F-4 pro...    60   3e-08

>gnl|LJGI|TC76054 similar to UniRef100_A7QBE9 Cluster: Chromosome chr13 scaffold_74,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_74, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (11%)
          Length = 1256

 Score = 81.8 bits (41), Expect = 9e-15
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                             
Query: 1106 cagaacttacagcaggtgttgaatggaataatctgtacacagttcaaga 1154
            |||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 921  cagaacgtacagtaggtgttgaatggaataatctgtacacagttcaaga 969


>gnl|LJGI|FS340221 similar to UniRef100_Q9C5B5 Cluster: E2F-4 protein; n=1;
           Arabidopsis thaliana|Rep: E2F-4 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (13%)
          Length = 720

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 279 tcgttatgacagctctttaggtctgttgacaaagaagttcatcaatttgatcaaacaagc 338
           |||||||||||| || |||||||| |||||||  ||||| |||| ||||||||| || ||
Sbjct: 635 tcgttatgacagttccttaggtcttttgacaagaaagtttatcattttgatcaagcatgc 694

                             
Query: 339 tgaggatggtattcttga 356
            |||||||| || |||||
Sbjct: 695 agaggatggaatgcttga 712