Miyakogusa Predicted Gene

Lj1g3v2155550.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2155550.1 Non Chatacterized Hit- tr|I1MC56|I1MC56_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48993 PE,70.39,0,B3 DNA
binding domain,B3 DNA binding domain; DNA-binding pseudobarrel
domain,DNA-binding pseudobarre,CUFF.28646.1
         (1995 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV781081 similar to UniRef100_A7NSY4 Cluster: Chromosom...   484   e-135
gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromos...    70   6e-11

>gnl|LJGI|AV781081 similar to UniRef100_A7NSY4 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 528

 Score =  484 bits (244), Expect = e-135
 Identities = 247/248 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtttcagttgaagtaaaaaccaaacctctaggagaaggaagaggtcataatgttgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atggtttcagttgaagtaaaaaccaaacctctaggagaaggaagaggtcataatgttgga 340

                                                                       
Query: 61  ggtgggagtgtagctgctgagatgaatctgctgaaggaacattgtggttcaaggttccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggtgggagtgtagctgctgagatgaatctgctgaaggaacattgtggttcaaggttccca 400

                                                                       
Query: 121 aagggtataaatccagagttatggcatgcttgcgcaggccctcttgtatccttgcctcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aagggtataaatccagagttatggcatgcttgcgcaggccctcttgtatccttgcctcag 460

                                                                       
Query: 181 ttaggaagtcttgcttattactttcctcagggacatattgagcaggtagctgcttctact 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 461 ttaggaagtcttgcttattactttcctcagggacatatcgagcaggtagctgcttctact 520

                   
Query: 241 ctagggat 248
           ||||||||
Sbjct: 521 ctagggat 528


>gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromosome chr10
           scaffold_43, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 435

 Score = 69.9 bits (35), Expect = 6e-11
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                       
Query: 444 tttctgcaaaattttaactgctagtgacacaagcacacatggtgggttctcggtaccacg 503
           ||||||||| | ||| |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 287 tttctgcaagactttgactgctagtgacacaagcactcatgggggattctctgtgcctcg 346

                                              
Query: 504 cagagcagcagaaaagctctttcctccattggact 538
           | | ||||| |||||  | ||||||||||||||||
Sbjct: 347 ccgggcagctgaaaaagtgtttcctccattggact 381