Miyakogusa Predicted Gene
- Lj1g3v2155540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2155540.1 Non Chatacterized Hit- tr|I1MNV7|I1MNV7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.13,0,glycine rich
nucleic binding domain,G-patch domain; coiled-coil,NULL; GCFC,GC-rich
sequence DNA-bind,CUFF.28650.1
(2619 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV777131 similar to UniRef100_A7PAZ3 Cluster: Chromosom... 737 0.0
gnl|LJGI|GO035558 similar to UniRef100_A7PAZ3 Cluster: Chromosom... 710 0.0
gnl|LJGI|DC597669 60 7e-08
>gnl|LJGI|AV777131 similar to UniRef100_A7PAZ3 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 408
Score = 737 bits (372), Expect = 0.0
Identities = 372/372 (100%)
Strand = Plus / Plus
Query: 9 ggaccaagagatggaccgattcggaatggacaacgatttcgaaggcggcgaatggattgc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ggaccaagagatggaccgattcggaatggacaacgatttcgaaggcggcgaatggattgc 96
Query: 69 cggcgagtattactaccggaagcgcaaagagaagcatgcacaaaccaaagacgatgtgct 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cggcgagtattactaccggaagcgcaaagagaagcatgcacaaaccaaagacgatgtgct 156
Query: 129 ctatggagtttttgccgactccgacgatgattattccagcagaaaacgccgcaaagatcg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctatggagtttttgccgactccgacgatgattattccagcagaaaacgccgcaaagatcg 216
Query: 189 cagtatgtccaaaaagcaagacctcaccaaaccggtgaattttgtctctacaggtacttt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cagtatgtccaaaaagcaagacctcaccaaaccggtgaattttgtctctacaggtacttt 276
Query: 249 tatgcctaatgaggagattgataagaattctagagagaaggatgaggatgagggggatgg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatgcctaatgaggagattgataagaattctagagagaaggatgaggatgagggggatgg 336
Query: 309 tgatgttagtgatggtaggcctggtttaggtcttggtatggggggattagggtctgctag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgatgttagtgatggtaggcctggtttaggtcttggtatggggggattagggtctgctag 396
Query: 369 cacatcagggtc 380
||||||||||||
Sbjct: 397 cacatcagggtc 408
>gnl|LJGI|GO035558 similar to UniRef100_A7PAZ3 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 473
Score = 710 bits (358), Expect = 0.0
Identities = 364/366 (99%)
Strand = Plus / Plus
Query: 727 aagaactctggtcttgggtttaataacgagactccggctgcgccgttgcctgctttgcag 786
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagaactctggtctcgggtttaataacgagactccggctgcgccgttgcctgctttgcag 61
Query: 787 gtggagagccagagtgtgtctgaagctgcccagccgacggttggtaggacgaaagagagg 846
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtggagagccagagtgtgtctggagctgcccagccgacggttggtaggacgaaagagagg 121
Query: 847 tcgtggtcaaggcaatcgaggtcgaagaagaagcaaaaggaggaagaatatgtaactgcc 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcgtggtcaaggcaatcgaggtcgaagaagaagcaaaaggaggaagaatatgtaactgcc 181
Query: 907 gagcagttgttggcgagcaagcaagaagaagattctgaagttgttcacaggattttagat 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gagcagttgttggcgagcaagcaagaagaagattctgaagttgttcacaggattttagat 241
Query: 967 atgaggggaccgcaggttcgagtgtatacaaatttgtctgacttgaatgctgaggagaaa 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atgaggggaccgcaggttcgagtgtatacaaatttgtctgacttgaatgctgaggagaaa 301
Query: 1027 gcaaaggaaagagatgtcccgatgccagaacttcagcataacgtagggttaatagttcgg 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcaaaggaaagagatgtcccgatgccagaacttcagcataacgtagggttaatagttcgg 361
Query: 1087 ttggcc 1092
||||||
Sbjct: 362 ttggcc 367
Score = 113 bits (57), Expect = 6e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 1142 cagcacttagcttgaaaaaagaaaaggagaagttagaaagtgaggcagcatttcaaa 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cagcacttagcttgaaaaaagaaaaggagaagttagaaagtgaggcagcatttcaaa 473
>gnl|LJGI|DC597669
Length = 392
Score = 60.0 bits (30), Expect = 7e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 2590 catcataaatcccttggtaaaagacgctga 2619
||||||||||||||||||||||||||||||
Sbjct: 392 catcataaatcccttggtaaaagacgctga 363