Miyakogusa Predicted Gene

Lj1g3v2155540.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2155540.1 Non Chatacterized Hit- tr|I1MNV7|I1MNV7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.13,0,glycine rich
nucleic binding domain,G-patch domain; coiled-coil,NULL; GCFC,GC-rich
sequence DNA-bind,CUFF.28650.1
         (2619 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777131 similar to UniRef100_A7PAZ3 Cluster: Chromosom...   737   0.0  
gnl|LJGI|GO035558 similar to UniRef100_A7PAZ3 Cluster: Chromosom...   710   0.0  
gnl|LJGI|DC597669                                                      60   7e-08

>gnl|LJGI|AV777131 similar to UniRef100_A7PAZ3 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 408

 Score =  737 bits (372), Expect = 0.0
 Identities = 372/372 (100%)
 Strand = Plus / Plus

                                                                       
Query: 9   ggaccaagagatggaccgattcggaatggacaacgatttcgaaggcggcgaatggattgc 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  ggaccaagagatggaccgattcggaatggacaacgatttcgaaggcggcgaatggattgc 96

                                                                       
Query: 69  cggcgagtattactaccggaagcgcaaagagaagcatgcacaaaccaaagacgatgtgct 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  cggcgagtattactaccggaagcgcaaagagaagcatgcacaaaccaaagacgatgtgct 156

                                                                       
Query: 129 ctatggagtttttgccgactccgacgatgattattccagcagaaaacgccgcaaagatcg 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctatggagtttttgccgactccgacgatgattattccagcagaaaacgccgcaaagatcg 216

                                                                       
Query: 189 cagtatgtccaaaaagcaagacctcaccaaaccggtgaattttgtctctacaggtacttt 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cagtatgtccaaaaagcaagacctcaccaaaccggtgaattttgtctctacaggtacttt 276

                                                                       
Query: 249 tatgcctaatgaggagattgataagaattctagagagaaggatgaggatgagggggatgg 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatgcctaatgaggagattgataagaattctagagagaaggatgaggatgagggggatgg 336

                                                                       
Query: 309 tgatgttagtgatggtaggcctggtttaggtcttggtatggggggattagggtctgctag 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgatgttagtgatggtaggcctggtttaggtcttggtatggggggattagggtctgctag 396

                       
Query: 369 cacatcagggtc 380
           ||||||||||||
Sbjct: 397 cacatcagggtc 408


>gnl|LJGI|GO035558 similar to UniRef100_A7PAZ3 Cluster: Chromosome chr16 scaffold_10,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_10, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 473

 Score =  710 bits (358), Expect = 0.0
 Identities = 364/366 (99%)
 Strand = Plus / Plus

                                                                        
Query: 727  aagaactctggtcttgggtttaataacgagactccggctgcgccgttgcctgctttgcag 786
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    aagaactctggtctcgggtttaataacgagactccggctgcgccgttgcctgctttgcag 61

                                                                        
Query: 787  gtggagagccagagtgtgtctgaagctgcccagccgacggttggtaggacgaaagagagg 846
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 62   gtggagagccagagtgtgtctggagctgcccagccgacggttggtaggacgaaagagagg 121

                                                                        
Query: 847  tcgtggtcaaggcaatcgaggtcgaagaagaagcaaaaggaggaagaatatgtaactgcc 906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tcgtggtcaaggcaatcgaggtcgaagaagaagcaaaaggaggaagaatatgtaactgcc 181

                                                                        
Query: 907  gagcagttgttggcgagcaagcaagaagaagattctgaagttgttcacaggattttagat 966
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  gagcagttgttggcgagcaagcaagaagaagattctgaagttgttcacaggattttagat 241

                                                                        
Query: 967  atgaggggaccgcaggttcgagtgtatacaaatttgtctgacttgaatgctgaggagaaa 1026
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  atgaggggaccgcaggttcgagtgtatacaaatttgtctgacttgaatgctgaggagaaa 301

                                                                        
Query: 1027 gcaaaggaaagagatgtcccgatgccagaacttcagcataacgtagggttaatagttcgg 1086
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  gcaaaggaaagagatgtcccgatgccagaacttcagcataacgtagggttaatagttcgg 361

                  
Query: 1087 ttggcc 1092
            ||||||
Sbjct: 362  ttggcc 367



 Score =  113 bits (57), Expect = 6e-24
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                     
Query: 1142 cagcacttagcttgaaaaaagaaaaggagaagttagaaagtgaggcagcatttcaaa 1198
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417  cagcacttagcttgaaaaaagaaaaggagaagttagaaagtgaggcagcatttcaaa 473


>gnl|LJGI|DC597669 
          Length = 392

 Score = 60.0 bits (30), Expect = 7e-08
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                          
Query: 2590 catcataaatcccttggtaaaagacgctga 2619
            ||||||||||||||||||||||||||||||
Sbjct: 392  catcataaatcccttggtaaaagacgctga 363