Miyakogusa Predicted Gene

Lj1g3v2141080.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2141080.1 tr|D0TZ45|D0TZ45_STYJA MADS-domain transcription
factor (Fragment) OS=Styrax japonicus GN=TM6 PE=3
S,45.71,2e-19,coiled-coil,NULL; K-box,Transcription factor, K-box;
AGL97, DNA BINDING / TRANSCRIPTION FACTOR,NULL;,CUFF.28630.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69884 UniRef100_Q533S3 Cluster: MADS box protein AP3;...   678   0.0  

>gnl|LJGI|TC69884 UniRef100_Q533S3 Cluster: MADS box protein AP3; n=1; Lotus
           japonicus|Rep: MADS box protein AP3 - Lotus japonicus,
           complete
          Length = 988

 Score =  678 bits (342), Expect = 0.0
 Identities = 342/342 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgaactcaggcttcttgagcaagaaatggacaacgccgccaaggctgttcgtgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atggatgaactcaggcttcttgagcaagaaatggacaacgccgccaaggctgttcgtgag 411

                                                                       
Query: 61  cgtaagtataaggtgataacaaatcagattgacacccaaaggaagaagtttaataacgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cgtaagtataaggtgataacaaatcagattgacacccaaaggaagaagtttaataacgaa 471

                                                                       
Query: 121 agagaggtgcacaatagactcctccgtgacctggatgcaagagcggaaaatccaccctat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 agagaggtgcacaatagactcctccgtgacctggatgcaagagcggaaaatccaccctat 531

                                                                       
Query: 181 gaattgatggacaatggaggggagtacgaatctgtgattggattctcaaatttaggtcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gaattgatggacaatggaggggagtacgaatctgtgattggattctcaaatttaggtcca 591

                                                                       
Query: 241 cgcatgtttgcattgagcttacaacctagtcatcctaatgctcataatagcggaggagga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cgcatgtttgcattgagcttacaacctagtcatcctaatgctcataatagcggaggagga 651

                                                     
Query: 301 gcaggctctgaccttaccacttaccccttacttttctagtaa 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gcaggctctgaccttaccacttaccccttacttttctagtaa 693