Miyakogusa Predicted Gene
- Lj1g3v2140780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2140780.1 Non Chatacterized Hit- tr|J3MVC1|J3MVC1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB08G3,77.5,0.0000000006,seg,NULL; FAMILY NOT NAMED,NULL;
EamA,Drug/metabolite transporter; Multidrug resistance efflux
trans,CUFF.28633.1
(792 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75019 1570 0.0
gnl|LJGI|TC76365 446 e-125
gnl|LJGI|BP034930 416 e-116
gnl|LJGI|TC59876 254 7e-67
>gnl|LJGI|TC75019
Length = 1590
Score = 1570 bits (792), Expect = 0.0
Identities = 792/792 (100%)
Strand = Plus / Plus
Query: 1 atggctgattctgcaggctcagcctcttccggcagaatgtggtgctctgtccctgaacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atggctgattctgcaggctcagcctcttccggcagaatgtggtgctctgtccctgaacgg 139
Query: 61 cttcagctgcatggagccatgctggccctgcaatttggctatgctggcttccatgttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cttcagctgcatggagccatgctggccctgcaatttggctatgctggcttccatgttgtc 199
Query: 121 tcaagagctgcccttaacatgggcattagcaaacttgttttcccagtctacagaaacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcaagagctgcccttaacatgggcattagcaaacttgttttcccagtctacagaaacatc 259
Query: 181 attgctttacttcttctccttccttttgcttacttcttggaaaagaaagagaggcctgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attgctttacttcttctccttccttttgcttacttcttggaaaagaaagagaggcctgca 319
Query: 241 atcactttaaacttcctcttccagttctttcttctggcccttgtcgggattacagcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atcactttaaacttcctcttccagttctttcttctggcccttgtcgggattacagcaaac 379
Query: 301 caaggtttctacttgcttgggttggacaacacatccccaacctttgcatcggccatacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaggtttctacttgcttgggttggacaacacatccccaacctttgcatcggccatacag 439
Query: 361 aactctgtcccagccatcacatttctcatggcagctatactcaggatagagcaagtgcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aactctgtcccagccatcacatttctcatggcagctatactcaggatagagcaagtgcgg 499
Query: 421 ttaaaccgaaaagatgggatagccaaggtggcgggaacggtgttctgtgttatcggggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttaaaccgaaaagatgggatagccaaggtggcgggaacggtgttctgtgttatcggggca 559
Query: 481 agtgtgatcacactctacaagggtccaaccatatacagcccggttccacctctcaacagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtgtgatcacactctacaagggtccaaccatatacagcccggttccacctctcaacagc 619
Query: 541 atcatcaccccacatccacagacacagttacttggctcagtctcactctcactaggagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atcatcaccccacatccacagacacagttacttggctcagtctcactctcactaggagat 679
Query: 601 gctaatggcaaaaattggacccttggatgcctctacctcatcggacactgcttgtcgtgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gctaatggcaaaaattggacccttggatgcctctacctcatcggacactgcttgtcgtgg 739
Query: 661 tccggttggcttgtcctgcaagcgcccatccttaagaagtacccggcacgcctctctgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tccggttggcttgtcctgcaagcgcccatccttaagaagtacccggcacgcctctctgtc 799
Query: 721 acttcctatacatgtttctttggactcatccaattccttgttattgctttgattgttgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acttcctatacatgtttctttggactcatccaattccttgttattgctttgattgttgaa 859
Query: 781 agagatgctcaa 792
||||||||||||
Sbjct: 860 agagatgctcaa 871
>gnl|LJGI|TC76365
Length = 973
Score = 446 bits (225), Expect = e-125
Identities = 225/225 (100%)
Strand = Plus / Plus
Query: 1 atggctgattctgcaggctcagcctcttccggcagaatgtggtgctctgtccctgaacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggctgattctgcaggctcagcctcttccggcagaatgtggtgctctgtccctgaacgg 140
Query: 61 cttcagctgcatggagccatgctggccctgcaatttggctatgctggcttccatgttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cttcagctgcatggagccatgctggccctgcaatttggctatgctggcttccatgttgtc 200
Query: 121 tcaagagctgcccttaacatgggcattagcaaacttgttttcccagtctacagaaacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaagagctgcccttaacatgggcattagcaaacttgttttcccagtctacagaaacatc 260
Query: 181 attgctttacttcttctccttccttttgcttacttcttggaaaag 225
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgctttacttcttctccttccttttgcttacttcttggaaaag 305
Score = 236 bits (119), Expect = 2e-61
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 287 ggattacagcaaaccaaggtttctacttgcttgggttggacaacacatccccaacctttg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ggattacagcaaaccaaggtttctacttgcttgggttggacaacacatccccaacctttg 776
Query: 347 catcggccatacagaactctgtcccagccatcacatttctcatggcagctatactcagg 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 catcggccatacagaactctgtcccagccatcacatttctcatggcagctatactcagg 835
Score = 127 bits (64), Expect = 1e-28
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 225 gaaagagaggcctgcaatcactttaaacttcctcttccagttctttcttctggcccttgt 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gaaagagaggcctgcaatcactttaaacttcctcttccagttctttcttctggcccttgt 498
Query: 285 cggg 288
||||
Sbjct: 499 cggg 502
>gnl|LJGI|BP034930
Length = 526
Score = 416 bits (210), Expect = e-116
Identities = 369/422 (87%)
Strand = Plus / Plus
Query: 16 ggctcagcctcttccggcagaatgtggtgctctgtccctgaacggcttcagctgcatgga 75
||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||
Sbjct: 80 ggctcagcctcttccaagagaatatggtgctctgtccctgaaaaactccagctccatggg 139
Query: 76 gccatgctggccctgcaatttggctatgctggcttccatgttgtctcaagagctgccctt 135
|| ||||||||| |||| || |||||||| || |||||||| |||||||||||||| |||
Sbjct: 140 gcaatgctggccttgcagttcggctatgcagggttccatgtggtctcaagagctgcactt 199
Query: 136 aacatgggcattagcaaacttgttttcccagtctacagaaacatcattgctttacttctt 195
|||||||| ||||||||||||||||||| ||||| || |||||||||||| | ||||||
Sbjct: 200 aacatgggtgttagcaaacttgttttccctgtctataggaacatcattgctctgcttctt 259
Query: 196 ctccttccttttgcttacttcttggaaaagaaagagaggcctgcaatcactttaaacttc 255
|||||||| ||||| ||||||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 260 ctccttccctttgcctacttcttggaaaagaaggagaggccagcgattactttgaacttc 319
Query: 256 ctcttccagttctttcttctggcccttgtcgggattacagcaaaccaaggtttctacttg 315
||| | ||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 320 ctcgtgcagttcttttttctggcacttgtggggattacagcaaaccaagctttctacttg 379
Query: 316 cttgggttggacaacacatccccaacctttgcatcggccatacagaactctgtcccagcc 375
||||| |||||||||||||| || ||||| ||||| || ||||||||||||||||| |||
Sbjct: 380 cttggcttggacaacacatcgcctaccttcgcatcagcaatacagaactctgtccctgcc 439
Query: 376 atcacatttctcatggcagctatactcaggatagagcaagtgcggttaaaccgaaaagat 435
|| ||||||||||||||||| ||| | |||||||||||||||||| | || ||||||||
Sbjct: 440 attacatttctcatggcagccatattaaggatagagcaagtgcggctgaatagaaaagat 499
Query: 436 gg 437
||
Sbjct: 500 gg 501
>gnl|LJGI|TC59876
Length = 1116
Score = 254 bits (128), Expect = 7e-67
Identities = 245/284 (86%)
Strand = Plus / Plus
Query: 229 gagaggcctgcaatcactttaaacttcctcttccagttctttcttctggcccttgtcggg 288
|||||||| || || ||||| ||||||||| | ||||||||| ||||||| ||||| |||
Sbjct: 190 gagaggccagcgattactttgaacttcctcgtgcagttcttttttctggcacttgtgggg 249
Query: 289 attacagcaaaccaaggtttctacttgcttgggttggacaacacatccccaacctttgca 348
|||||||||||||||| ||||||||||||||| |||||||||||||| || ||||| |||
Sbjct: 250 attacagcaaaccaagctttctacttgcttggcttggacaacacatcgcctaccttcgca 309
Query: 349 tcggccatacagaactctgtcccagccatcacatttctcatggcagctatactcaggata 408
|| || ||||||||||||||||| ||||| ||||||||||||||||| ||| | ||||||
Sbjct: 310 tcagcaatacagaactctgtccctgccattacatttctcatggcagccatattaaggata 369
Query: 409 gagcaagtgcggttaaaccgaaaagatgggatagccaaggtggcgggaacggtgttctgt 468
|||||||||||| | || |||||||||| || || ||| | || ||||| ||||| |||
Sbjct: 370 gagcaagtgcggctgaatagaaaagatggaattgctaagatagcaggaacagtgttttgt 429
Query: 469 gttatcggggcaagtgtgatcacactctacaagggtccaaccat 512
||| | || |||||||||||||| || ||||| |||||||||||
Sbjct: 430 gttgtgggagcaagtgtgatcacgctttacaaaggtccaaccat 473
Score = 149 bits (75), Expect = 3e-35
Identities = 135/155 (87%)
Strand = Plus / Plus
Query: 589 tcactaggagatgctaatggcaaaaattggacccttggatgcctctacctcatcggacac 648
||||| |||||||| |||||||| || ||||||||||| ||| ||||||||||||| ||
Sbjct: 556 tcactgggagatgcaaatggcaagaactggacccttggctgcgtctacctcatcgggcat 615
Query: 649 tgcttgtcgtggtccggttggcttgtcctgcaagcgcccatccttaagaagtacccggca 708
|||||||| ||||| | |||||| || |||||||| ||| |||| ||||||||||||||
Sbjct: 616 tgcttgtcttggtctgcttggctcgtgctgcaagcacccgtcctcaagaagtacccggct 675
Query: 709 cgcctctctgtcacttcctatacatgtttctttgg 743
|||||||| ||||||||||| || |||||||||||
Sbjct: 676 cgcctctccgtcacttcctacacttgtttctttgg 710