Miyakogusa Predicted Gene

Lj1g3v2139540.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2139540.1 tr|D7MEZ7|D7MEZ7_ARALL Predicted protein
(Fragment) OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAF,67.21,1e-16,seg,NULL; RING FINGER PROTEIN 127,NULL; PUA
domain-like,PUA-like domain; LON,Peptidase S16, lon N-te,CUFF.28885.1
         (373 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72154 similar to UniRef100_A7NT45 Cluster: Chromosome...   708   0.0  

>gnl|LJGI|TC72154 similar to UniRef100_A7NT45 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 646

 Score =  708 bits (357), Expect = 0.0
 Identities = 369/373 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcattaacactaccacagcttatcccttcccctccatcatcttcccctctatctcac 60
           |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 192 atggcattaacactaccacagcttatcccttcacctccatcatcttccactctatctcac 251

                                                                       
Query: 61  aacccctgccaaaaccccaccagactctccataaaccctaacttcccatcctcctcaaca 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaaccctgccaaaaccccaccagactctccataaaccctaacttcccatcctcctcaaca 311

                                                                       
Query: 121 actcatgtcctccaccaccaccgccgccgccgcggcggcaacctcacgtgctcggcttcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 actcatgtcctccaccaccaccgccgccgccgcggcggcaacctcacgtgctcggcttcg 371

                                                                       
Query: 181 tctttctcggagaagcatcacaccgactccccgaggtccgacgacgtggtggagcttcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tctttctcggagaagcatcacaccgactccccgaggtccgacgacgtggtggagcttcct 431

                                                                       
Query: 241 ctgtttccactccctttggtgctcttccccggcgccatcctccctctccagatcttcgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctgtttccactccctttggtgctcttccccggcgccatcctccctctccagatcttcgag 491

                                                                       
Query: 301 ttccgctaccgcatcatgatgcacacactcctccacaccgatctccgcttcggcgtcatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttccgctaccgcatcatgatgcacacactcctccacaccgatctccgcttcggcgtcatc 551

                        
Query: 361 tacaccgccgccg 373
           ||||||| |||||
Sbjct: 552 tacaccgacgccg 564