Miyakogusa Predicted Gene

Lj1g3v2138380.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2138380.1 Non Chatacterized Hit- tr|C5WWN8|C5WWN8_SORBI
Putative uncharacterized protein Sb01g032790 OS=Sorghu,57.47,3e-19,PUA
domain-like,PUA-like domain; seg,NULL; SUBFAMILY NOT NAMED,NULL; RING
FINGER PROTEIN 127,NULL; L,CUFF.28880.1
         (457 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72154 similar to UniRef100_A7NT45 Cluster: Chromosome...   852   0.0  

>gnl|LJGI|TC72154 similar to UniRef100_A7NT45 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 646

 Score =  852 bits (430), Expect = 0.0
 Identities = 447/455 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcattaacactaccacagcttatcccttcacctccatcatcttccactctatctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atggcattaacactaccacagcttatcccttcacctccatcatcttccactctatctcac 251

                                                                       
Query: 61  aaaccctgccaaaaccccaccagactctccataaaccctaacttcccatcctcctcaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaaccctgccaaaaccccaccagactctccataaaccctaacttcccatcctcctcaaca 311

                                                                       
Query: 121 actcatgtcctccaccaccaccgccgccgccnnnnnnncaacctcacgtgctcggcttcg 180
           |||||||||||||||||||||||||||||||       ||||||||||||||||||||||
Sbjct: 312 actcatgtcctccaccaccaccgccgccgccgcggcggcaacctcacgtgctcggcttcg 371

                                                                       
Query: 181 tctttctcggagaagcatcacaccgactccccgaggtccgacgacgtggtggagcttcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tctttctcggagaagcatcacaccgactccccgaggtccgacgacgtggtggagcttcct 431

                                                                       
Query: 241 ctgtttccactccctttggtgctcttccccggcgccatcctccctctccagatcttcgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctgtttccactccctttggtgctcttccccggcgccatcctccctctccagatcttcgag 491

                                                                       
Query: 301 ttccgctaccgcatcatgatgcacacactcctccacaccgatctccgcttcggcgtcatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttccgctaccgcatcatgatgcacacactcctccacaccgatctccgcttcggcgtcatc 551

                                                                       
Query: 361 tacaccgacgccgtcaccggcaccgccgaggtcggctgcgtcggcgaggtcatcaagcac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tacaccgacgccgtcaccggcaccgccgaggtcggctgcgtcggcgaggtcatcaagcac 611

                                              
Query: 421 gagcgtctcgtcgatgaccgattctttctgatctg 455
           |||||||||||||||||||||||||| ||||||||
Sbjct: 612 gagcgtctcgtcgatgaccgattcttcctgatctg 646