Miyakogusa Predicted Gene
- Lj1g3v2128340.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v2128340.2 Non Chatacterized Hit- tr|I1JT85|I1JT85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9231 PE=,91.72,0,Second
domain of Mu2 adaptin subunit (ap50) of ap2 adaptor,Clathrin adaptor,
mu subunit, C-terminal;,CUFF.28587.2
(906 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63113 similar to UniRef100_A7NT73 Cluster: Chromosome... 997 0.0
gnl|LJGI|TC61512 homologue to UniRef100_A7NT73 Cluster: Chromoso... 668 0.0
gnl|LJGI|BP044110 similar to UniRef100_A7NT73 Cluster: Chromosom... 180 1e-44
gnl|LJGI|TC60667 similar to UniRef100_A7NT73 Cluster: Chromosome... 161 9e-39
gnl|LJGI|TC67481 similar to UniRef100_A7NT73 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC63113 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 710
Score = 997 bits (503), Expect = 0.0
Identities = 503/503 (100%)
Strand = Plus / Plus
Query: 404 acttccatgagtctgtacaccttgatagttttgatgttgaccgaactttatcattggtac 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttccatgagtctgtacaccttgatagttttgatgttgaccgaactttatcattggtac 60
Query: 464 caccagatggggaatttcctgtcatgaattatcgtatgactcaaccatttaagccaccct 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caccagatggggaatttcctgtcatgaattatcgtatgactcaaccatttaagccaccct 120
Query: 524 ttcgtattaatgcattgattgaagaaacaggacccctcaaggctgaagtgaccattaaaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcgtattaatgcattgattgaagaaacaggacccctcaaggctgaagtgaccattaaaa 180
Query: 584 tacgtgctgaattcaactcaagcatcaatgctaatacagttcttgtacagatgccactac 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacgtgctgaattcaactcaagcatcaatgctaatacagttcttgtacagatgccactac 240
Query: 644 caacatctacggctcgtgttaattttgagttagaacctggagcagttggtcacacaactg 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caacatctacggctcgtgttaattttgagttagaacctggagcagttggtcacacaactg 300
Query: 704 attttaaggaaacaaataaaagactggaatggggcataaaaaaggttgttggtggttctg 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attttaaggaaacaaataaaagactggaatggggcataaaaaaggttgttggtggttctg 360
Query: 764 aacatactttacgagcaaaactgacactttcacatgagtttcatggaaacatcatgaaag 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacatactttacgagcaaaactgacactttcacatgagtttcatggaaacatcatgaaag 420
Query: 824 aagcagggcctcttagcatgactttcactatacctatgtacaatgcttcaaggcttcagg 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagcagggcctcttagcatgactttcactatacctatgtacaatgcttcaaggcttcagg 480
Query: 884 tgaagtacttgcaaatagcaaag 906
|||||||||||||||||||||||
Sbjct: 481 tgaagtacttgcaaatagcaaag 503
>gnl|LJGI|TC61512 homologue to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 898
Score = 668 bits (337), Expect = 0.0
Identities = 337/337 (100%)
Strand = Plus / Plus
Query: 1 atgatcgattttggttatgtgcaaacaacatctactgaacttttgaagtcatatgttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atgatcgattttggttatgtgcaaacaacatctactgaacttttgaagtcatatgttttc 551
Query: 61 aatgagccaattatgattgatgctgcgcggcttcctcccatgggtcctgcttccattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aatgagccaattatgattgatgctgcgcggcttcctcccatgggtcctgcttccattttt 611
Query: 121 atgcaagggaccaaacgaatgccaggtacagctattacaaaatctgtttttgctaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 atgcaagggaccaaacgaatgccaggtacagctattacaaaatctgtttttgctaatgaa 671
Query: 181 tctggtggtaagaagagggaagagatctttgttgatgtaattgagaaaataagtgttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tctggtggtaagaagagggaagagatctttgttgatgtaattgagaaaataagtgttaca 731
Query: 241 ttcaactctagtggatttatacttactagtgagatagatggcaccattcaaatgaagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ttcaactctagtggatttatacttactagtgagatagatggcaccattcaaatgaagagt 791
Query: 301 tatcttactggtaacccagagattcgacttgctctca 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 792 tatcttactggtaacccagagattcgacttgctctca 828
>gnl|LJGI|BP044110 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 356
Score = 180 bits (91), Expect = 1e-44
Identities = 147/163 (90%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 742 aaaaaggttgttggtggttctgaacatactttacgagcaaaactgacactttcaca-tga 800
||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||
Sbjct: 356 aaaaaggtttttggtggttctgaacatactttacgggccaaactgacactttcaccctga 297
Query: 801 gtttcatggaaacatcatgaaagaagcagggcctcttagcatgactttcactatacctat 860
||||||||||| || |||||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 296 gtttcatggaacactcctgaaagaagccgggcctcttagcctgactttccctatacctat 237
Query: 861 gtacaatgcttcaaggcttca-ggtgaagtacttgcaaatagc 902
|||| ||||||| |||||||| |||||||||||||| ||||||
Sbjct: 236 gtaccatgcttccaggcttcacggtgaagtacttgccaatagc 194
>gnl|LJGI|TC60667 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1633
Score = 161 bits (81), Expect = 9e-39
Identities = 276/341 (80%)
Strand = Plus / Plus
Query: 7 gattttggttatgtgcaaacaacatctactgaacttttgaagtcatatgttttcaatgag 66
||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||
Sbjct: 426 gattttggttatgtgcaaacaacatctactgaattgttgaagtcctatgttttcaatgag 485
Query: 67 ccaattatgattgatgctgcgcggcttcctcccatgggtcctgcttccatttttatgcaa 126
|||||| ||||||| || || || || | || | || |||||| | || ||| |||
Sbjct: 486 ccaattgtgattgacgccgcacgcctgtcacctcttggacctgctgcaatgttttcacaa 545
Query: 127 gggaccaaacgaatgccaggtacagctattacaaaatctgtttttgctaatgaatctggt 186
||||| ||| |||||||||| | |||| |||||||||||||| |||| | || | ||
Sbjct: 546 gggacaaaaagaatgccaggaatagctgttacaaaatctgttgttgcaacagagcccggg 605
Query: 187 ggtaagaagagggaagagatctttgttgatgtaattgagaaaataagtgttacattcaac 246
|||| | |||||| || ||||| || ||| ||||||||||||| || | || || | |
Sbjct: 606 ggtagaaggagggaggaaatcttcgtagatataattgagaaaatcagcctcacttttagc 665
Query: 247 tctagtggatttatacttactagtgagatagatggcaccattcaaatgaagagttatctt 306
|||||||||| |||||| ||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 666 tctagtggatatatactgacttccgagattgatggcaccatacaaatgaagagctatctt 725
Query: 307 actggtaacccagagattcgacttgctctcaatgaggacct 347
||||| || || || |||||| | ||||| ||||| |||||
Sbjct: 726 actggaaatcctgaaattcgattagctcttaatgaagacct 766
Score = 61.9 bits (31), Expect = 6e-09
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 458 tggtaccaccagatggggaatttcctgtcatgaattatcgtatgactcaaccatttaagc 517
|||||||||| ||||| |||||||| |||||||| || ||||| || || ||||| ||
Sbjct: 901 tggtaccacccgatggtgaatttccagtcatgaactaccgtattacccaggaatttaggc 960
Query: 518 caccctttcgtattaatgcattgattgaagaaacaggacccctcaaggctgaagt 572
| || |||||||||||||| || || |||||| |||| |||| ||||| |||||
Sbjct: 961 ctccttttcgtattaatgctttaatcgaagaagcagggtcccttaaggcagaagt 1015
Score = 54.0 bits (27), Expect = 2e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 661 gttaattttgagttagaacctggagcagttggtcacacaactgattttaaggaaacaaat 720
|||| |||||| ||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 1104 gttagttttgaactagaacctggagctgttggacaaacaactgactttaaggaggcaaat 1163
Query: 721 aaaagactggaatgg 735
|| || || ||||||
Sbjct: 1164 aagaggctagaatgg 1178
>gnl|LJGI|TC67481 similar to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 743
Score = 54.0 bits (27), Expect = 2e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 661 gttaattttgagttagaacctggagcagttggtcacacaactgattttaaggaaacaaat 720
|||| |||||| ||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 175 gttagttttgaactagaacctggagctgttggacaaacaactgactttaaggaggcaaat 234
Query: 721 aaaagactggaatgg 735
|| || || ||||||
Sbjct: 235 aagaggctagaatgg 249