Miyakogusa Predicted Gene

Lj1g3v2127290.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2127290.1 tr|B9GRK7|B9GRK7_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_412109
PE=4,60.98,2e-19,SEC14 CYTOSOLIC FACTOR-RELATED,NULL; SEC14 RELATED
PROTEIN,NULL; coiled-coil,NULL,CUFF.28615.1
         (252 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO014939 weakly similar to UniRef100_A7P8X1 Cluster: Ch...   248   1e-65
gnl|LJGI|TC67382 similar to UniRef100_A7P8X1 Cluster: Chromosome...   222   8e-58
gnl|LJGI|TC65915                                                      172   6e-43
gnl|LJGI|AV769442 similar to UniRef100_A7P8X1 Cluster: Chromosom...    88   3e-17

>gnl|LJGI|GO014939 weakly similar to UniRef100_A7P8X1 Cluster: Chromosome chr3
           scaffold_8, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 402

 Score =  248 bits (125), Expect = 1e-65
 Identities = 212/241 (87%)
 Strand = Plus / Minus

                                                                       
Query: 4   acaaacctctcctcatctaccttagaacgccttggtgagcttgaagagaaagttgacatg 63
           ||||||||| |||||||||||| ||||||||| |||| ||||||||||||||||| ||||
Sbjct: 397 acaaacctcccctcatctacctcagaacgcctcggtgggcttgaagagaaagttggcatg 338

                                                                       
Query: 64  ctagagtcaaaacttaatgccatgccacatgcaaaagaagagttgctgaatgctgctatt 123
           ||| || ||| ||| | || |||||||||||  ||| | |||||||||||||||||||||
Sbjct: 337 ctacagacaagactcagtgtcatgccacatgagaaacaggagttgctgaatgctgctatt 278

                                                                       
Query: 124 tatcgagtggacgcgttggaagcagagcagataactactaagaaggctttacacgaagct 183
           ||||| ||||| ||||||||||| |||| |||  |||| ||||||| |||||||||||||
Sbjct: 277 tatcgcgtggatgcgttggaagcggagctgatttctacaaagaaggttttacacgaagct 218

                                                                       
Query: 184 ttgataaaacaagaagaacttatgacatacaaagacaatcaggaaaaaagcaaattcaag 243
           ||||||| ||||||||| |||||| |||||| ||||| ||| ||||||||||||||||||
Sbjct: 217 ttgataagacaagaagagcttatggcatacatagacagtcatgaaaaaagcaaattcaag 158

            
Query: 244 a 244
           |
Sbjct: 157 a 157


>gnl|LJGI|TC67382 similar to UniRef100_A7P8X1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 971

 Score =  222 bits (112), Expect = 8e-58
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggaagcagagcagataactactaagaaggctttacacgaagctttgataaaacaagaaga 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggaagcagagcagataactactaagaaggctttacacgaagctttgataaaacaagaaga 438

                                                               
Query: 201 acttatgacatacaaagacaatcaggaaaaaagcaaattcaagacaagaaga 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acttatgacatacaaagacaatcaggaaaaaagcaaattcaagacaagaaga 490


>gnl|LJGI|TC65915 
          Length = 725

 Score =  172 bits (87), Expect = 6e-43
 Identities = 107/111 (96%), Gaps = 2/111 (1%)
 Strand = Plus / Plus

                                                                       
Query: 144 agcagagcagataactactaagaaggctttaca-cgaagctttgataaaacaagaagaac 202
           |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1   agcaaagcaaataactactaagaaggctttacaacgaagctttgataaaacaagaagaac 60

                                                              
Query: 203 ttatgaca-tacaaagacaatcaggaaaaaagcaaattcaagacaagaaga 252
           |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttatgacaatacaaagacaatcaggaaaaaagcaaattcaagacaagaaga 111


>gnl|LJGI|AV769442 similar to UniRef100_A7P8X1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 544

 Score = 87.7 bits (44), Expect = 3e-17
 Identities = 140/172 (81%)
 Strand = Plus / Minus

                                                                       
Query: 29  aacgccttggtgagcttgaagagaaagttgacatgctagagtcaaaacttaatgccatgc 88
           |||||||| |||||||||||||||| |||||||| ||| | ||||||| ||||   ||||
Sbjct: 464 aacgcctttgtgagcttgaagagaaggttgacatactaaattcaaaacctaatataatgc 405

                                                                       
Query: 89  cacatgcaaaagaagagttgctgaatgctgctatttatcgagtggacgcgttggaagcag 148
           || |||  ||||| ||  |||| ||||||||| ||||||| ||||| ||  |||||||||
Sbjct: 404 catatgagaaagaggaactgctaaatgctgctgtttatcgtgtggatgctctggaagcag 345

                                                               
Query: 149 agcagataactactaagaaggctttacacgaagctttgataaaacaagaaga 200
           |   |||  | || |||||||| ||  ||||||||||||||| |||||||||
Sbjct: 344 aattgatcgcaacaaagaaggcattgtacgaagctttgataagacaagaaga 293