Miyakogusa Predicted Gene

Lj1g3v2126040.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2126040.2 tr|I7L2V4|I7L2V4_LEUPS Two-component system
histidine kinase OS=Leuconostoc pseudomesenteroides 4882,29.82,5,
,CUFF.28563.2
         (305 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598934 homologue to UniRef100_A7ILT6 Cluster: LigA; n...   420   e-117
gnl|LJGI|TC80184 similar to UniRef100_Q4MJB7 Cluster: ABC transp...    52   2e-06
gnl|LJGI|BW596429 similar to UniRef100_A7NXI2 Cluster: Chromosom...    50   8e-06

>gnl|LJGI|DC598934 homologue to UniRef100_A7ILT6 Cluster: LigA; n=1; Xanthobacter
           autotrophicus Py2|Rep: LigA - Xanthobacter sp. (strain
           Py2), partial (2%)
          Length = 456

 Score =  420 bits (212), Expect = e-117
 Identities = 226/231 (97%)
 Strand = Plus / Plus

                                                                       
Query: 75  caaggaagcgttcgagcgaagaagcttctccgcatcgcatttcatgattttcgttgcatt 134
           |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1   caaggaagcgttcgagcgaagaagcttctccgcaccgcatttcgtgattttcgttgcatt 60

                                                                       
Query: 135 tttgtttgtcatcgcgtctgcctcctctgcgacctactgctcgcctcctcttcaccaggt 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttgtttgtcatcgcgtctgcctcctctgcgacctactgctcgcctcctcttcaccaggt 120

                                                                       
Query: 195 atatatgtgttggtttctggtgaaaatgggggagggagccgtgtggagccaagccttttg 254
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 atatatgtgttggtttctggtgaaaatgggggagggagccgtgtggagccaanccttttg 180

                                                              
Query: 255 ttcattgcttctcatattatccctcaattccgtgcgaaccccgttatagat 305
           ||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 181 ttcattgcttctcatattatccctcaattccgtgctaaccccgttacagat 231


>gnl|LJGI|TC80184 similar to UniRef100_Q4MJB7 Cluster: ABC transporter permease
           protein; n=1; Bacillus cereus G9241|Rep: ABC transporter
           permease protein - Bacillus cereus G9241, partial (7%)
          Length = 1608

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 241 agccaagccttttgttcattgcttctcata 270
           ||||| ||||||||||||||||||||||||
Sbjct: 220 agccaggccttttgttcattgcttctcata 249


>gnl|LJGI|BW596429 similar to UniRef100_A7NXI2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 467

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 150 gtctgcctcctctgcgacctactgctcgcctcc 182
           |||||||||||||||||||| ||| ||||||||
Sbjct: 359 gtctgcctcctctgcgacctgctgatcgcctcc 391