Miyakogusa Predicted Gene

Lj1g3v2096250.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v2096250.2 Non Chatacterized Hit- tr|K3ZQ41|K3ZQ41_SETIT
Uncharacterized protein OS=Setaria italica GN=Si028720,32.24,6e-18,ARM
repeat,Armadillo-type fold; seg,NULL; no description,Armadillo-like
helical; DUF3453,Protein of ,CUFF.28634.2
         (822 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78923                                                      188   4e-47

>gnl|LJGI|TC78923 
          Length = 548

 Score =  188 bits (95), Expect = 4e-47
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                       
Query: 728 gcgtgctgacgagttctttacgaggagttaatggccttggatgcttcttctttggtggtt 787
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gcgtgctgacgagttctttacgaggagttaatggccttggatgcttcttctttggtggtt 270

                                              
Query: 788 catatattggaagttacaatgatatgactatgtaa 822
           |||||||||||||||||||||||||||||||||||
Sbjct: 271 catatattggaagttacaatgatatgactatgtaa 305